Argopecten irradians (bay scallop): 138331745
Help
Entry
138331745 CDS
T10542
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR-like isoform X1
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138331745
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138331745
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138331745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4
Yop-YscD_cpl
zf-RING_6
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-RING_10
RING_XB3-XBAT31
zf-RING_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
138331745
NCBI-ProteinID:
XP_069135607
LinkDB
All DBs
Position
9:complement(20566075..20592959)
Genome browser
AA seq
592 aa
AA seq
DB search
MEDAVEGSWGKLVGVSTNVDTSPYPLVGDKFTIGRARDCDISLSNNKLVSGRHCHIEKDA
DGKVWLCDTSTNGTLLNVSVKITKGNRRELNHGDEFFVVYKRDEDDFNIGYMYQNLEELQ
KEMDATQEYSSGFEIEATLIDDCVNIADEDDDEQSKKRPSGEADSEPPAKRVKTETDSSE
FHTSKTEANVKDIQGSKTPKGKEESQTKGGQEKTTPEDKSDQKETSSADKGMESTSKSAA
GSGVCQDGPNKIEEALICTICQEILYDCISLQPCMHSFCAGCYSDWMDKSNECPTCRMKV
ERINKNHIVNNLIEAYLQDNPGKRRDEEDIKELDAKNKISRDMLYPESNRHRRIFDSSDS
DGSWSGSGSGPLRPTQSSDSDRSGSGSGSGPLSPSPLSNSDSDESGPVSPSGPQRSPFFV
SSDSIWSRSDSRSGSPRSPPLLTPGSDGSGSGSGSGSTSSPHRPTYGSDGSGSSSRSGFP
SPLPGSGSGFSPPSSPDRLTSDSDGSGPVSPSGSQSPPFFVSPGSDGSGSGSGSGSTSSQ
HRPTPGSDGSGSGSRSGSPSPPHRPTPAKTVCRQCPDNKEPGRSCTEVQSHL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgcagttgagggatcgtgggggaagcttgtcggtgtcagtactaacgttgac
acttcgccatatccgttagttggagacaagtttacgattgggcgagccagagattgcgat
atatccttgtcaaacaacaaacttgtatccgggagacactgtcacatagaaaaagatgct
gacgggaaagtgtggttatgcgatacaagtacaaatggcaccctgctgaatgtgagtgtc
aaaataacgaaaggaaatagaagagagctaaatcatggagatgaattctttgttgtctat
aagagggatgaagatgattttaatattggatacatgtaccagaacctggaggagctacaa
aaggagatggacgctacacaggaatacagttctggatttgaaatagaagcaacacttata
gatgattgtgttaacatagcagatgaagatgatgatgagcagagtaagaagaggccttct
ggggaagctgacagtgaaccaccagctaagcgagtaaaaacagaaacggacagtagtgag
ttccacacctcgaaaactgaggccaatgtcaaagatattcaagggagcaaaactcctaag
ggtaaagaggaatcacaaactaaaggtggccaggagaagacaactcccgaggataaaagt
gatcagaaagagacatcttcagcagacaaaggaatggaaagcactagtaaatctgcggct
gggtctggtgtctgtcaggatggccctaataaaatagaggaagcccttatctgtaccata
tgccaggaaattctatacgactgtatcagcctacagccctgtatgcactcattctgtgct
ggatgctactcagattggatggacaagtcaaacgaatgccccacgtgtcgtatgaaggtg
gagagaatcaacaagaaccacatcgtcaacaatctcatagaggcttatctacaggataac
cctggtaaaaggagagatgaagaggatattaaggagttagatgccaagaacaaaatatca
agagacatgttatacccagaaagtaatcgtcataggaggatatttgacagctccgatagt
gatgggtcatggtcaggttccggttccggtcctctccgtccaacacagagctccgatagt
gataggtcagggtcaggctccggttccggtcctctcagtccatcgcctctatctaactcc
gatagtgatgagtcaggtccagtttccccttccggccctcaaagatcaccgttttttgtc
agctccgatagtatttggtcaaggtcagattcccgttccggttctcccaggtcaccgcct
cttctcacccccggtagtgatgggtcagggtcaggttccggttccggttctactagttca
ccgcatcgtcctacctacggtagtgatgggtcagggtcaagctcccgttccggttttccc
agtccattgccagggtcaggctccggtttcagtcctcccagttcgccggatcgtctcacc
tccgatagtgatgggtcagggccagtttccccttccggttctcaaagtccaccgtttttt
gtcagccccggtagtgatgggtcagggtcaggttccggttccggttctaccagttcacag
catcgtcccacccccggtagtgatgggtcagggtcaggctcccgttccggttcacccagt
ccaccgcatcgtcccacaccagctaagacagtgtgcagacaatgccccgataataaggag
ccgggtagatcatgtacagaggttcaatcacatctgtga
DBGET
integrated database retrieval system
