Argopecten irradians (bay scallop): 138331819
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Entry
138331819 CDS
T10542
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138331819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138331819
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138331819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
138331819
NCBI-ProteinID:
XP_069135712
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Position
9:complement(23122479..23247574)
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AA seq
521 aa
AA seq
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MKMDLQVSNTTSNGTEDIPNDPGKMFIGGLSWQTTGDSLKEHFGKYGEIKEAMVMKDPTT
KRSRGFGFVTFRESAAVEKVLANGPHELDSKTVDPKVAFPRKAQPKMVTRTKKIFVGGLS
AATTVEDVKNYFGNFGKIEDAMLMFDKTTNRHRGFGFVTFESEDVVDKVCDIHFHEINKK
MVECKKAQPKEVMLPTSLARGRGLARGTFMTNEDGELVWDLSSDIIMPELLTSPHLGGVP
LTSGVEGFLPHGLHTAAYPYAGRGFPAIAPAGYYYPGLGTAYSPSSMVSAAAARSVVAAA
AARGSGAPRAGRSILSVPSTPGLPGYAGYLPTTPSAPGERHMSPIYADLGAATANQLTAG
LQRSEHSPLPVSTSPLHRVGDHILTAQRATDHNGLVSLNGMESLMWNLRGERLSGVGGKA
LTNRCIQMHTDGRTQPYQVVVKSTQSTQAVINNLGQQQAFPTATSPATSSRGIPLANSPG
PCDLYSQDGLSYIQATSPQPSSFGHNLAGQLIATNFQNGYH
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggacctccaggtttcaaacactactagcaatgggactgaggatatacctaat
gacccagggaaaatgttcatcggcggtctcagctggcaaacaaccggagattcgttaaag
gaacacttcgggaaatatggggagataaaggaagcgatggttatgaaggatccgacaact
aaacgatccaggggcttcggctttgtcacatttagagaatctgcagctgtagagaaagtg
ctggctaacgggcctcatgagctggactcaaaaacggtggaccccaaggtagcatttccc
aggaaggctcaaccaaagatggttaccagaactaagaaaatctttgttggagggctgtct
gcagctaccacagtggaagatgtcaaaaattattttggcaattttggcaagattgaggat
gcaatgcttatgtttgacaagacaacaaaccggcacagagggtttggattcgtgacgttt
gaatctgaagatgtggtagataaagtttgtgatatccatttccatgagattaacaagaag
atggtggagtgtaaaaaagcgcagcccaaagaagtcatgttaccaacaagcctagcaagg
ggtaggggcctagcaaggggcacattcatgacgaatgaagatggcgagcttgtgtgggat
ttatcaagcgacattataatgccagagctgttgacctctccccatcttggaggtgttccc
ttgacaagcggtgtggaaggcttcctgccccatggactacatactgctgcctacccctat
gctggccgtggatttcccgccattgcccctgcagggtactactatccaggacttggtaca
gcgtatagtccgtcctcaatggtctcggccgctgcggctcgcagtgtggttgcggccgca
gcagctcgtggctccggggcaccgcgtgcgggacggagcattttaagtgtcccctctact
cccgggctccctggttatgctgggtacctccctaccaccccctctgccccgggggagaga
cacatgtcccccatctatgccgaccttggtgctgcgacggccaatcaattgaccgcaggc
ttacaaaggagcgaacattcaccgctgccggtcagcacctcgcctctacatcgtgttggc
gatcatatacttactgcccagcgtgctacagaccacaatggactggtcagtttaaatgga
atggaaagtttaatgtggaacctgaggggtgaaaggctctccggtgtaggaggcaaagca
ttgactaaccggtgcatacaaatgcataccgacggaaggacacaaccgtaccaagtcgtg
gtcaagtcgactcagtccacacaagctgtgataaataaccttggccaacaacaggctttc
cctacagctacctccccagccactagcagtcgtggtatcccgctagccaacagccccggg
ccctgtgatctgtacagccaggacggtcttagctacattcaggccaccagtccccagcca
tccagctttggccacaacctagccggacagcttatagccactaatttccagaatggttac
cattaa
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