Argopecten irradians (bay scallop): 138332097
Help
Entry
138332097 CDS
T10542
Name
(RefSeq) F-box/WD repeat-containing protein 8-like
KO
K10264
F-box and WD-40 domain protein 8
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138332097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138332097
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138332097
Cul7 complex
Target recognizing subunit
138332097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
WD40_CDC20-Fz
F-box
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
eIF2A
Beta-prop_EIPR1
Ribosomal_L24e
Motif
Other DBs
NCBI-GeneID:
138332097
NCBI-ProteinID:
XP_069136155
LinkDB
All DBs
Position
9:complement(32663105..32672265)
Genome browser
AA seq
707 aa
AA seq
DB search
MDPDKTLDSFRNEWKKELNKKTTEKRSEQLPTSGQSGSSASTQKSVLSDEGQSSLTHVQL
SLERSVTNSSSNQEKFKIETFYQKCKCSESQKDDCRESEGTLNYLGENTEQINSYYPFNI
VHNLLSKSNPSKDPGHRERHVSDDKVDKCSLCGGALYQTHGLKRSRNLSKESKRYEKERI
EDVFKRRRTESEHFSKGCLLDQFLTDLNEIAEIPFFDKSLPREVALKIFHHLGLKDLCRC
SQVSRSWRSLAEDELLWCNLCHSLGYEQDQVTRDRGQWKAIVRENVTKDKQIISNWKNRT
GKQTSLQYVQGGILCAVNSHTDTVVAGYSNGEVKLWDLDNEESCILKPSNTSLQIDEVMD
TGTISIEVSHVEVTSTLTVAQYKQGHLDVWSLKDDNINPVYKIPPAPHGQRNTFCVAKSC
DMVVTGYGMDVSIYTHTETGFQLHSLLNRYSGKPVSHLNMLEVGIEEPRVFITTQVGELY
LHCPGETAEELKEYTYHQDPSCTGGAVHCVDVRLDPAMIALGQGTVGPVYDIETAKMVRL
LTGHMHIITCLNLVDSPPYQVVTGSMDRRIRIFDLRTDQTAAVLSGHTNYITTVQMDDWK
VVSGDGGGFVSVWDRRMSTKLWEWHNRHPVGYCHFYKQCLISGNIPEAKTELADEHLAHR
RFRGSLNVCDFSADLTTQDLPEICHSTYDEPEAYNYNIRLAVPYDNI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgataaaactcttgacagttttcgaaatgaatggaagaaggagctaaataag
aaaacaacagaaaaaagatcagagcaattacctaccagtggtcaatcgggatcatctgcg
tctacccaaaagtcagtactgtctgatgaagggcagtcatcattaacacacgtgcagttg
tcattagaaagatcggtaacaaattcttcgagcaatcaggaaaagtttaaaattgaaaca
ttttatcaaaaatgtaaatgttccgagagccaaaaagatgactgtagagagtcagagggg
actctgaattatttaggtgaaaacactgaacaaatcaactcgtactacccctttaacatt
gtacataatttattgagtaagtccaacccttctaaggatccaggtcacagagaaagacat
gtgagtgacgataaagtagacaagtgttctctgtgtggcggagctctctatcaaacacat
ggattaaagagatcaagaaatttgtcaaaagaatctaaaagatatgaaaaagaaagaatt
gaggatgttttcaaaaggagaagaactgaaagtgaacacttttcaaaggggtgtctatta
gatcagtttttaacagacttaaatgaaattgcagaaatacccttctttgacaaatcttta
cctcgagaagttgctcttaagattttccaccatcttggtttgaaagacttgtgcagatgt
tctcaggtgagtcgtagctggcggagccttgctgaagatgaacttctgtggtgtaatctt
tgtcacagtttgggatacgaacaggaccaggtgaccagggaccgtggtcagtggaaagcg
attgtccgagaaaatgtcacaaaggacaagcagatcatttctaattggaagaaccgtaca
ggtaagcagacgtcgctgcagtatgttcagggaggaattctttgtgctgtgaactcacac
acagacaccgtggtggcagggtattccaatggagaggtgaagctatgggaccttgataat
gaagaaagctgtatactaaagccttccaatacatctctacaaatcgacgaagtgatggat
actggtacaatctctatagaagtgtcccatgtagaggtgacctccacactgactgtagcc
cagtataaacaaggtcacttggatgtttggagtttgaaggatgataacatcaatcctgtc
tataaaataccaccagcacctcatggtcagcgcaatacattctgtgtcgctaagtcatgt
gacatggttgtcacaggttacggtatggacgtcagcatctacactcatacagagacaggt
ttccaactccacagcttgttaaaccggtactcaggaaaacctgtatcccacctgaacatg
ttggaggtcgggatagaggagcctcgggtgttcatcaccacacaagtaggagagctgtat
ctacactgcccaggggagacagcggaggagttgaaggagtatacataccaccaggacccg
tcctgtaccggcggggctgtccattgtgtggacgtcagactggaccctgccatgatagcc
ctgggacagggaactgttggccctgtgtatgacattgaaacagccaagatggtgaggttg
ttaactggccacatgcatatcatcacctgtttaaacctagtggacagtcctccttaccag
gtggtgacaggaagtatggacagaaggatcaggatatttgatctgaggacagaccagact
gctgcagtattatcaggccatacaaactatataacaactgttcagatggatgactggaag
gtcgtatccggagatggagggggattcgtcagtgtgtgggatcgtcgtatgtctacaaag
ttatgggagtggcataacagacatcctgtaggctattgccacttctataaacagtgcctt
atatctggtaacatcccagaagctaagacagaactcgctgacgaacatttggctcatcga
aggttccgtggttctctgaacgtatgtgatttctctgccgacctcacaacacaagaccta
cctgagatctgtcattcgacctatgatgagccggaggcctataactacaacatacgattg
gctgttccttacgataatatataa
DBGET
integrated database retrieval system
