Argopecten irradians (bay scallop): 138332261
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Entry
138332261 CDS
T10542
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04142
Lysosome
airr04144
Endocytosis
airr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138332261
04142 Lysosome
138332261
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138332261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138332261
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
airr04147
]
138332261
Membrane trafficking [BR:
airr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
138332261
Exosome [BR:
airr04147
]
Exosomal proteins
Proteins found in most exosomes
138332261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
HEAT_Nup120
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
138332261
NCBI-ProteinID:
XP_069136380
LinkDB
All DBs
Position
9:complement(38075753..38111466)
Genome browser
AA seq
1700 aa
AA seq
DB search
MATLLPIRFQEHLQLQNVGINASNIGFSTLTMESDKYICIREKVSETAQVVIIDMNDTNN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKSHTMTDDVIFWKWISVNTVA
LVTETCVYHWSMEGDSQPQKIFDRHTNLAGCQIINYRTDAKQQWLLVIGISAQTGAEAAT
GPEAAQNRVVGAMQLYSVERKVSQPIEGHAAAFATFKMEGNTNPSTLFMFAVRGAQGGKL
HVIEVGQPPQGNQPFTKKAVDVFFPPEAQNDFPVAMQVSPKHSVSFLITKYGYIHMYDIE
TGTCIYMNRISGDTIFVTAPHEASSGIIGVNRKGQVLSVSVEEDNIVQYLTTTLQNPDLA
LKVASRGNLPGAEDLFVRKFNNLFQSGNYAEAAKVAAGAPKGILRTPQTIQRFQQVPAAT
GQTSPLLQYFGILLDKGQLNKYESLELCRPVLQQGRKQLLEKWLKEEKLECSEELGDLVK
ATDPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGFTPDFIFLLRNIMRMNPEQ
GLQFAQMLVQDDEPLADLNQIVDVFMEFNLIQQCTSFLLDALKNNRPAEAPLQTRLLEMN
LMSAPQVADAILGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNP
EWLVNYFGSLSIEDSLECLKAMLQANIRQNLQVCVQIATKYHEQLGTQSLIEIFESFKSF
EGLFYFLGSIVNFSQDTDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKL
TDQLPLIIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPARLPVVVGGLLDVDCGEDV
IKQLILVVKGQFSTDELVEEVEKRNRMKLLLPWLEMRVHEGVQEPATHNALAKINIDSNN
NPERFLRENQFYDSLVVGKYCEKRDPHLACVAYERGQNDMELIKVCNENSLFKSEARYLV
RRRDTDLWAVVLQEDNEYRRQLIDQVVQTALSETQDPEDISVTVKAFMTSDLPNELIELL
EKIVLENSVFSDHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEA
FAIFKKFEVNTSAIQVLIDHVNNLDRAYEFAERCNDPAVWSQLGRAQLNQGLVKEAIDSF
IKADDPSEYMEVVNVASNNNSWEDLVKFLQMARKKARETFIETELIYAYAKTNRLADLEE
FISGPNHANITQVADRCFDDQMYEAAKLLYNNVSNYARLAITLVHLGEYQGAVDGARKAN
STKTWKEVCFACVNNEEFRLAQMCGLHIVVHADELEDLINYYQDRGYFEELISLLEAALG
LERAHMGMFTELAILYSKYKPEKMREHLELFWSRVNIPKVLRAAEQAHLWPELVFLYDKY
EEYDNAVITMMSHPTAAWRESQFKDIITKVANIELYYKAIQFYLDFKPLLLNDLLLVLTP
RLDHTRAVNFFTKVNEIPLVKPYLRAVQKNNNKATNEALNNLLIEEEDYQGLRTSIDAYD
NFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVDLCKKDKLFKDAMCYAGESRNID
IAEDLIAWFLENQYHECFAACLFQCYDLLRPDVILELAWRHNIMDFAMPYMIQVVREYIS
KVDKLEQSEAVRSEEEQKAEDRPIVFAENQLMLTAGPATMIPPPQAPSPQPGYGGQYPPG
MVPGMAPGMAPGNVPYGYSM
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattgctccccatacggtttcaggagcatttacagctccaaaatgttggcatc
aatgcatctaacattggcttcagtacccttaccatggagtcggataagtacatctgtatc
agggagaaagtcagcgaaacagcccaggtcgtcatcattgatatgaacgacactaataac
ccaatcagacgccctatttcggccgactctgccatcatgaatcctgctagcaaagttatt
gctctcaaagctgggaaaactctacaaatcttcaatattgagatgaaaagcaagatgaag
tcacacaccatgacagatgatgttattttctggaaatggatttctgtcaacaccgtagct
ctggtcacagaaacctgtgtctaccactggagtatggaaggcgactcacaaccccagaag
atctttgacagacatactaacctggctggatgtcagattatcaactacaggactgatgcc
aagcaacagtggcttcttgtcattggaatttcagcacagacgggggctgaagccgcaacg
gggcctgaggcagcacaaaaccgtgttgtgggtgcaatgcagttgtattctgtggagagg
aaagtcagccagcctatcgagggacacgccgctgccttcgctacattcaagatggagggc
aacacaaacccttcaacactgttcatgttcgcagtgaggggcgcccagggtggtaagctt
catgtcattgaagtgggtcagccaccacaaggaaatcagccattcacaaagaaggctgta
gatgtgttcttcccacctgaagcccagaatgacttcccagtagccatgcaggtgagtcca
aaacacagtgtatctttccttatcaccaagtatggctacatccacatgtatgacatagag
actggtacctgtatctacatgaaccgcatcagtggggacaccattttcgtcacagctcca
cacgaggcttcctcgggaatcatcggagtcaacaggaaaggacaggtattgtctgtgagt
gttgaggaggataacatcgtccagtacctgaccaccacactacagaaccctgaccttgcc
ctcaaggtcgcatcccgtggcaacttgcctggtgcagaagacctctttgtccgtaaattc
aacaacctgttccagagtggaaactatgctgaggctgccaaagtagcagcaggagctccc
aagggtattctgcgaaccccacagaccattcaacgattccaacaggtacccgcagccact
ggccagacttctccactgctccagtactttggtatcttactggacaaaggtcaactcaac
aaatacgaatccctagagctgtgtcgaccagttttacagcagggccgcaaacagctgctg
gagaagtggctgaaggaagagaagcttgaatgtagtgaagagcttggtgatctagtgaag
gccacagacccaactctggctctgtctgtttacctcagggccaatgttcccaacaaagtt
atccaatgttttgctgagactggacaattccagaagattgtactgtatgctaagaaagtg
ggcttcacccccgattttatattcctgttgcgtaacattatgaggatgaacccagagcag
ggcctacagtttgcccagatgttggtacaggatgatgaacctctggctgaccttaaccag
attgtagatgtgtttatggagtttaacctgatccagcagtgtacatccttcttgttggac
gccctcaagaacaacaggccggctgaggctccactacagaccaggctgctagaaatgaac
cttatgtctgccccacaggtagcagatgccattctgggtaaccagatgtttacccactac
gaccgagcacatgtggcccagctgtgtgagaaggcaggactcttacagagggcactagaa
cactacactgatttatatgacatcaagcgagcagttgtacatacccatctacttaatcca
gagtggctggtgaactacttcggctccctctctatagaggattccctagaatgcctgaag
gccatgctccaggcaaatattcgccagaacctacaagtctgcgtacagatcgctacaaaa
taccacgagcaactcggaacacagtctcttattgaaattttcgagtctttcaaaagtttc
gaagggttgttctatttcctcgggtcaattgtgaacttcagtcaggataccgatgtacac
ttcaagtacattcaggccgcatgtaagactggacaaatcaaagaggtggagagaatttgt
cgcgagagcaactgttatgaccctgaaagagtgaaaaacttcctcaaggaggccaagctt
acagatcagctaccattgatcattgtgtgtgaccgattcgactttgtccacgacttggtg
ttgtacctgtaccgtaacagcttacagaagtacatagagatttatgtacagaaggtgaac
cccgcacgtctccccgtcgtggtcggtggtctgttagatgtggactgtggagaggatgtc
atcaaacaactcatccttgttgtcaagggacaattctctactgacgagttagtggaggag
gtcgagaaacgtaacaggatgaagctgctgttgccctggctggagatgcgtgttcatgag
ggagtacaggaaccagctacacacaacgctctcgctaagattaacatagacagtaacaac
aatccagagaggttcctcagagagaaccagttttacgacagtttggtagtgggtaaatac
tgtgagaagcgtgaccctcacttggcttgtgtagcctacgagagaggacagaacgacatg
gagctaatcaaggtgtgcaatgagaactcgctgttcaagagtgaggcgaggtacctggta
cgtcgccgggacacagacctgtgggctgtcgtgttacaggaggacaacgagtatagacgt
cagctgatcgatcaggttgtacaaactgctctgtcagagacacaggaccctgaggatatt
tctgtcacagttaaagctttcatgacctccgaccttccaaatgaacttattgaacttctg
gagaagattgttctggagaattctgttttcagtgaccacagaaatctacagaatctgttg
atcctgaccgccataaaggctgaccgtacacgagtgatggaatatatcaaccgcctcgac
aactacgatgccccagacattgctaacattgctattagtaacgagctctttgaggaagcc
ttcgctatcttcaagaagtttgaagtaaacacatcagctattcaggtattgatagaccat
gttaacaatctggaccgagcctatgagttcgctgaacgatgtaacgaccctgctgtctgg
agccagctcggaagagctcaactgaaccagggactagtaaaggaggccattgattccttc
atcaaggctgatgatccttcagaatacatggaagtagtcaacgtagctagtaacaacaat
agctgggaagacctagtaaaattcttacagatggcaagaaagaaggcccgcgaaacattt
atagaaacagaacttatttacgcctatgcaaaaacgaatagactagcagatttagaggag
ttcatttctggacccaaccacgcaaatattacacaggtggctgaccgttgctttgatgac
cagatgtatgaagcagctaaactgctgtacaacaacgtgtcaaactatgcacgtctggcc
attacattagttcacttaggagaataccagggcgctgtggacggggcacgcaaggctaac
agtacaaagacatggaaagaggtgtgctttgcttgtgtgaacaatgaggagttccgcctg
gcccagatgtgtgggctccacatagtagtacatgctgacgaactagaggatttaataaat
tattaccaagaccggggctactttgaggagcttatatccctactggaggcagcattaggt
ttagaaagagcccacatgggtatgtttacagaactagctattttatactcgaaatacaaa
ccagagaagatgagagaacatttagaactattctggtccagagtcaacattccaaaggtt
ttaagagcagcagaacaggctcacttgtggcccgagcttgtgttcttgtacgataagtac
gaggagtatgacaacgctgtaatcaccatgatgagtcatccaacagcagcgtggcgcgag
agtcagtttaaggacattataacaaaggtcgccaacattgagctatactacaaagcaata
cagttctacctggacttcaaaccactactactgaacgacctactcttggttctaacgccc
cgcctcgaccacacgcgggcagtcaacttcttcaccaaggttaacgaaattccactggtg
aaaccatatctacgggcagtgcaaaagaacaacaacaaggcaacaaatgaagcgctgaac
aacctcctgattgaggaagaggactatcagggccttcgtacgtctatcgacgcctacgat
aactttgataacatcaccctagcccagcgtctcgagaaacacgagctgattgagttcaga
cgtattgctgcttacctctacaagggaaataaccgctggaaacagtcagttgacctctgt
aaaaaggacaagctgtttaaggatgccatgtgttatgcgggtgagtcgaggaacattgac
atcgcagaggacctgatcgcttggttcctggagaaccagtaccatgaatgtttcgctgcc
tgtctgttccagtgttacgacttgttacgaccggacgtgatcctggagctggcctggcga
cacaatatcatggatttcgccatgccatatatgattcaggttgtgagagaatacatttcc
aaggttgataaactagagcagtcagaagctgtacgttcagaagaggaacagaaggcagag
gatcgccctattgtatttgcggagaaccaactgatgttgactgctggaccagccaccatg
attcctcctccccaggccccctcgccccagccaggctatggaggccagtacccaccagga
atggtaccaggcatggcccccggaatggcccccggaaatgttccgtatggatacagcatg
tga
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