Argopecten irradians (bay scallop): 138333027
Help
Entry
138333027 CDS
T10542
Name
(RefSeq) lamin Dm0-like
KO
K07611
lamin B
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138333027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
airr04812
]
138333027
Cytoskeleton proteins [BR:
airr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
138333027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
CCDC138_cc
bZIP_1
DUF5955
Sas-6_C_CC
SNCAIP_SNCA_bd
MAD
Motif
Other DBs
NCBI-GeneID:
138333027
NCBI-ProteinID:
XP_069137226
LinkDB
All DBs
Position
10:8178120..8190412
Genome browser
AA seq
573 aa
AA seq
DB search
MATPASAVRSPRAARSPSPARLSRLEEKNTLKNLNDRLAQYIDRVRYLENENSRLTVQIK
SVEETVTRDRSNIKAVFQSELDEARRLLDDTSKEKARLQIEVGKYKEEADDWKLKYHKTD
KELRDAQGQNADLLKQNADLENQATQAEGQRKQLDKECAKLRNAMAVLERQLATAKKQLE
DETLLRVDLQNRIQSLKEDLSFKTQVYEQELNETRIKTTQEIEEVDSSVRMDYEAKLQEV
LQSVRDEHDIQLKEVRLEIENLYERKMDDMNSAMDRSMNSSSLMTQDLMSVRKQVDELSA
ENSKLRSQNATYEKRIANLEAQLTREQEDFLNRLAQKDQEIADLRISLNEQVQEYTDLLE
IKIKLDNEIMAYRKLLEGEEERLNLSQSSSTSESTPIRSVARGAKRKRVTLSDTVEEFSQ
SSSSSDFATTSSATSHVEIKETDGEGKFITISNTSDEDIAIGGWQLKHTAGQDGDQATNY
KFHRSLLLRANQTCTVWSSGLNKTHSPPSDLVMKTQKWVTANVMKTVLINGDGEEVASRE
MSKTLARTTQSFRTGYDDVDSRRDGGNNGCSIM
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccagcaagtgccgtgcgatctccgcgagcggcccgatctccttcaccagct
agactgagccggctcgaggaaaagaatactcttaaaaatctaaacgatcgcttagcgcag
tatatcgacagagtgagatatctggaaaatgaaaatagtcgtctgacagtccagatcaag
tccgtcgaggaaactgtgactagagacagatcgaacataaaggctgttttccagtcggag
ctcgacgaggcgagaagacttttggatgacacatcgaaagagaaagcacgtttacagatc
gaagtagggaaatacaaagaggaagcggacgactggaaattaaaatatcacaaaactgac
aaagaactgagagatgctcaaggtcagaatgcagaccttcttaaacagaatgcagacctt
gaaaaccaagcaacacaagcagagggtcagagaaagcagctggacaaggagtgtgctaaa
ctccggaatgctatggccgtcttagagagacagttggctactgccaaaaagcagttggaa
gacgagactttactgcgtgttgatctacaaaaccgtatccagagtcttaaggaagatctg
tccttcaaaacacaggtgtacgaacaggaattaaatgagactcgtataaaaaccacccaa
gaaattgaggaggtggactcttcagtacgcatggactatgaggctaagctacaggaagta
ctccagagtgtacgagacgaacatgacattcagttaaaagaagtccgacttgaaattgaa
aacctctatgagaggaagatggacgatatgaattcggctatggaccgcagcatgaacagt
tcctctcttatgacacaagacctgatgagtgtcaggaaacaagtggacgaactctcagca
gaaaactccaaactacgctctcagaatgctacctatgagaaacgtatagctaacttagag
gcacagctaacccgtgagcaggaggacttcttgaaccgccttgcccagaaggaccaggag
attgctgatctccgcatcagtctgaatgaacaggtgcaggagtacactgaccttctagaa
atcaaaatcaaacttgataatgaaattatggcatacagaaaacttcttgaaggagaggaa
gagaggttgaatctgtcccagtcctcttctacgtccgagtcgacgccgattcgttctgtt
gcccgtggagccaagcgtaagcgtgtgaccctgtccgatactgtcgaggaattcagccaa
tcatcatctagttctgactttgctactacatcttcagctactagccatgttgaaattaag
gaaacagatggtgaaggaaagttcatcactatttccaatacttctgatgaggacattgcc
attggaggatggcaattaaaacacacagcaggccaagatggggatcaagccaccaactac
aaatttcacagaagccttcttctgcgggcaaaccagacctgtactgtatggagttcagga
ttgaataagacgcacagtcctccgtctgacctggtgatgaagactcagaagtgggtcaca
gccaatgtaatgaagaccgtccttatcaatggtgatggagaggaggtagcttccagagaa
atgtctaaaacgctagcccgtaccacacagtccttccgtactggctatgatgatgttgat
agtcgccgtgacggaggcaacaacggatgttccatcatgtag
DBGET
integrated database retrieval system