Argopecten irradians (bay scallop): 138333273
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Entry
138333273 CDS
T10542
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
airr03021
]
138333273
03036 Chromosome and associated proteins [BR:
airr03036
]
138333273
Transcription machinery [BR:
airr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
138333273
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
138333273
SLIK complex
138333273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
138333273
NCBI-ProteinID:
XP_069137651
LinkDB
All DBs
Position
10:16867309..16911331
Genome browser
AA seq
1896 aa
AA seq
DB search
MSKGGLDFSSPLFGPTCNDDNSKSKFKKSSLDTRNGSDDKKYDVEDSGSGSNTSGSSSDS
DSESGSGSGSGSGSGGCEDRRSGKSSGSDSSSDSSQEDNSDRNSNKSESGSDSDEDHDSK
RPKLEITTSDSQDVPSSTGKKGRPRKADIGELKEIVEQNPDLYGLRRSGRAKKEPIRYTS
INESDDGDSAGRKRSRRKGSGEWEGSSDSDSGSSDGYKAAIRQKRQPQSKRPSRRPAKTQ
KRRAAGGRRRERRLSDSYDSDSDEDRRTSYRSTANKIRGKASGNKLNKAPALRRKSAKKN
VSYKEASDDRTDSDDLIEVAAGDETAEPAVEDNRECIEKILGDRIGRKTAIGSKTTIYNV
QDNGDPNEGCDPQTEETSQQYHIKWKNWAHIHNTWESYDNIKEQKVHGLKKLENYIKKTN
EIKDWKDHASPEDQDYYDIQQEMMEDLYQQYRNCERVIAHSNQKMANENNGYPDYLCKWM
GLPYSECTWEEGELVSRKFQSAVDEYQARNKSQKIPTKLSKVLKSRPKFAPLKVQPKFLG
GVESLELRDYQLNGVNWLMHAWCKENSVILADEMGLGKTIQTISFISILHNNYQLHGPYL
LVVPLSTVVAWQREFETWAPEMNVVIYMGDIISRNKIREFEWCHPGNKRLKFNVLITTYE
ILLKDKSFLGGVQWAFLGVDEAHRLKNDDSLLYRSLFDFHSNHRLLITGTPLQNSLKELW
ALLHFIMPDKFDCWSDFERMHSSENKTGFTNLHKELEPFLLRRMKKDVEKSLPAKTEQIL
RVEMTSLQKQYYKWILTKNYKALSKGLKGNIGSFVNIIMELKKCCNHTQLIRQPDDDANM
EKFQALMKGSGKLLLLDKLLCRLKETGHRVLIFSQMVRMLDLIADYLKARHFNHQRLDGS
MRGDLRKAALDHFNAEGSPDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQAR
AHRIGQKNQVSVYRLVTKGSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLDRGNVPSSN
ATPFKKEELSAILKFGAEELFKECDSDDEEPQVDIDEILQRAETREVEPTTVGDDLLSQF
KVVSFDNLEDEEIERLGETNHDDAGKMWDAIIPEDDIRRIEEEERQQQLLELNLPPRSRK
TIQQLQQEYDSDENKKRRKKKNDADDSDSSDDDEEEDRPKKRGRPRTIAKEAVKGFTDSE
IRRFIKSFKKFGHPMTRLDSVACDAELQEKSESDLKRLAETIKHSCEVAMEEYKTKLEGD
PNFEAGKKTHRGPTLKISSVTVNAQSLMKAEQELEPLAVAIPSNKELKSKYRLTAHVKAV
HWDCPWDIEEDSDLLKGIHEYGMGSWEAIKMDPSLNLHDKILPDGGDLKPQAKHLQTRAE
YLLKVLKRQFDIEKHGIAPVTKTKRKRKPVLSKAEVIEKDISDSDTGQHHSVKDETTLDS
IPESPAKKRKKKDNSEKEAKSHMADDEDTKDSLDFHRENKKKKGTKAKNKKNKSGPVHIT
AEKEPVAISTEAEFGAELPSNVFAKCKEMMRPVKRALKRLDNPDEGLTEKEQVVHTKHCL
LKIGDRINECLAEYNDPDIIKQWRSHLWIFVSKFTEFDDQKLHKLYKRAYRKREEDKEKE
DIEPHSQERHHHSSSHDKSGHKRSLDHADHIKKEHSQKPMHNSTDHWSSKEHKNSASNSN
GPWHSAATKGGRDSTSQRADSKASPADRWTQASPLARPDDPTRNRYGDGGGSGTYKRSKQ
HQDGYRGGFHANEHKYGAGDGHHRFNSDNRREYSSGSQKQFHRDNASFHHHDRPDHHSSG
KYRPDYRSDRSDRNDRGDYQRPDYGQFGHRDYGGSGGSSRSFARPGGDNYVSHSDRKRKS
DNFDRRSYSSLKDPRLAEDHSNDGYSNAGSDSHGKH
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagggtggattggattttagcagccccctgtttggtccaacatgtaatgatgat
aactccaaatcaaagtttaagaagtcttcacttgataccagaaatggttctgacgataaa
aaatatgatgtagaagacagcgggtcgggttcaaacactagtggttcaagttccgactct
gattctgaatcaggatctggatcagggtcgggatcaggatcaggaggatgtgaagatcga
aggtcggggaagtcaagtggatcagatagctcgtctgactccagccaggaggacaatagt
gatagaaactcaaacaagtcagagagtgggtcggatagtgatgaagatcatgactccaaa
agaccaaagttagaaataacaacctctgattcccaagatgtaccatcgtcgacgggcaag
aaaggtcgtcctcgcaaagctgacattggcgaactcaaagagatagtagaacagaatcct
gatctgtatggactccgacggtcaggaagggctaagaaggagcctatacgatacacctca
attaatgaaagcgatgatggtgattctgctggcaggaaacgatctcgtagaaaaggatca
ggggaatgggaaggcagcagtgacagtgacagtggatcgagtgatggatacaaagcagct
atcagacagaaacggcaaccacagtctaaaaggccgtctcgtcgcccagctaagacacaa
aaacgtcgagcagcgggagggaggcggagagaaaggcgcctctctgactcgtatgactct
gacagtgatgaagatcgaagaacttcctatagaagtacagcaaataaaataaggggcaag
gcatcggggaacaagcttaacaaagctcccgccctgcgaaggaaaagtgcaaagaaaaat
gttagttacaaggaagcctccgatgaccgtacagactcggacgacctgatagaggttgct
gcaggagatgagacggcggaaccagctgtagaggataacagggagtgtatagaaaagatt
cttggcgatcgcattggacgaaaaacagctattggcagcaagacaacaatctacaatgta
caggacaatggcgatcctaatgaaggctgtgatccccagactgaggagacgtcccagcag
taccacattaaatggaagaactgggctcatatccataatacttgggagtcgtacgataac
atcaaggagcagaaagtacacggacttaaaaagctggagaactacatcaaaaaaacgaat
gaaatcaaagattggaaggatcatgcctcgcccgaggatcaggattactatgacattcaa
caggaaatgatggaagatttgtaccagcagtatcgcaactgtgaacgcgtcatagctcat
tccaaccaaaagatggcgaatgagaataatggctatccggactacttgtgtaagtggatg
ggcctaccatactcggagtgtacttgggaagaaggcgagctggtctctcgaaaattccag
tcagctgtagacgagtaccaagctcgtaacaaatcacaaaaaattcctacaaagctttca
aaggttttgaagtcccgtcctaaatttgcacccttgaaagtccagccaaaattcctaggg
ggtgttgagtccttggagctacgagactaccagctgaatggagtaaactggctaatgcat
gcctggtgcaaagagaacagtgtgatccttgcggatgagatggggctgggtaagactata
cagacaatatcattcatctccatactccataacaactaccaactccacggcccataccta
ttggttgtaccgctctcaacagtggtcgcctggcaacgcgagtttgaaacctgggcacca
gaaatgaacgttgtgatatatatgggtgatatcatcagtagaaacaagattagggagttt
gaatggtgtcacccaggaaacaagagattaaagttcaatgtacttataactacatatgaa
atattactcaaagacaagtctttccttggtggtgttcagtgggctttccttggtgttgat
gaggctcaccgtctgaagaatgacgactcccttctgtacagatcattatttgatttccat
tctaatcatcgcctcctcattacaggcacaccactccagaactccctcaaagagctctgg
gcccttctacacttcattatgcctgacaaatttgattgctggtctgactttgaaagaatg
cattcttcagagaacaaaactggatttacaaacttacacaaagaactggaacccttcttg
ttacgccggatgaaaaaagatgtggaaaaatctcttccggcaaaaactgaacaaatcctg
cgtgtggaaatgacatccttacaaaaacagtactataagtggatcctcacaaaaaactac
aaggcattgtcaaaaggcctaaagggtaatattgggagttttgtgaacattataatggaa
ctaaaaaagtgctgtaaccacacccaacttattcgtcagccagatgatgatgcaaatatg
gaaaaatttcaggcccttatgaagggcagtggaaagttgttgttgttagacaaacttttg
tgtcgacttaaagaaacgggacatcgagtgctaatattttcacagatggttcgcatgctg
gatcttatagctgactatctcaaggcccggcatttcaatcaccagaggctagatggttct
atgcgaggtgatttacgaaaggcagctctagatcatttcaatgcagaaggttcgccggac
ttttgtttcctcttgtcgacaagagcaggtggcctgggtattaatcttgcaacagcagac
acagtcattatatttgatagtgattggaatccacaaaatgatctccaggctcaagctaga
gcccatagaataggtcaaaagaaccaggtgagcgtgtacagacttgtgacaaaaggcagc
gtcgaggaagacattgtagagcgagccaaacggaagatggtgcttgaccatttggtcatc
caaagaatggacacaactggtcggacagttctagatcgtggcaacgtcccttctagcaat
gctaccccatttaagaaggaagaattgagtgccattctcaaattcggtgccgaagaatta
ttcaaagaatgtgatagtgatgatgaggaaccacaggtggacattgatgaaatccttcaa
cgagcagaaactagagaagttgaaccaaccactgtaggagatgacctgctctcacagttt
aaagttgtcagtttcgataatttggaggacgaggaaattgaacgccttggagaaactaac
catgacgatgcaggaaaaatgtgggatgccataattccagaagatgatatccgtaggatt
gaagaggaggagagacaacaacagttgttggaattgaatctgcctcctcgtagtaggaaa
acgatacaacagctccagcaagagtatgattctgatgaaaacaaaaaacgaagaaaaaag
aagaatgatgctgacgactctgattctagtgatgatgatgaagaggaggatcggccaaag
aaacgaggacgtccaagaactattgcaaaagaggctgtgaagggcttcaccgattccgag
ataaggaggttcatcaaaagcttcaaaaagtttggccatcctatgactagacttgactcg
gtggcgtgtgatgcagaattacaggagaagtcagagtctgacttgaagcgtctggctgaa
acaataaagcacagctgtgaggtagctatggaggaatacaagacaaagctggagggagat
cctaacttcgaggctggaaagaagacacacagagggccaacattgaagatctctagtgta
actgttaatgctcagtccttaatgaaagcagaacaggaactagagccattggctgtcgca
ataccttccaacaaggagctaaagagcaagtaccgcctgactgctcacgtgaaagcagtg
cattgggactgtccctgggacattgaggaagacagtgatctactcaaaggaatccacgag
tacggaatgggcagctgggaggcaatcaaaatggaccctagtctcaacctacatgacaag
atccttcctgatggaggtgacctcaaacctcaggccaagcatttacagacacgagcagaa
tacctccttaaagtgctcaaacgacagtttgatattgaaaaacatggcattgctccagta
acaaaaacaaaaaggaaaagaaaaccagtattatctaaagcagaggtgatagagaaagat
atttctgattccgacacgggccaacatcattccgtaaaagatgagacaacactagacagt
attccagaaagtcctgccaagaaaaggaagaagaaggataatagtgagaaggaggcgaag
tcgcacatggctgatgacgaggacacaaaggattctctcgacttccacagggaaaacaag
aaaaagaagggaacaaaagccaagaacaaaaagaacaaatctggtcctgtacatatcact
gctgagaaggagcctgtagctatatcaacagaggcagagttcggtgccgagttaccttct
aatgtgtttgctaagtgtaaggaaatgatgaggccagtgaagagagccttaaagagactt
gataacccagatgagggcctcacagagaaggagcaggtagtgcacaccaagcactgccta
ctgaagataggtgatcgaattaatgaatgcctggcagagtataatgacccagacatcatt
aaacagtggagaagtcatctttggatatttgtgtcaaaattcacagaatttgatgatcaa
aaactacacaagctgtacaaacgagcctacagaaaacgcgaggaagacaaggagaaagaa
gatattgaacctcattctcaggagcgtcatcaccattcatcatcacacgacaaatctggc
cacaagcgatcacttgaccacgcagaccacatcaaaaaagaacattcacagaaacctatg
cataacagtacggaccattggagcagtaaagaacataaaaattctgcctctaatagtaac
ggtccctggcatagtgcagccaccaaaggagggcgagacagtaccagtcagcgggctgac
tcgaaagctagtcccgctgaccggtggacacaagccagtccgctagcccgacccgacgat
cctacaagaaataggtatggggatggtggtggatctgggacatacaaacgatccaaacaa
caccaggacggttataggggaggattccacgccaacgaacacaaatatggagctggagac
ggacatcataggttcaacagtgataacaggcgcgaatattcgtctggaagccaaaaacaa
tttcatcgagataatgcatcatttcaccatcatgatcggccagatcatcacagcagtggc
aagtacaggccagactatcgtagtgaccgctctgataggaacgatcgtggagattaccag
cggccggactatggtcagtttggacaccgtgattatgggggtagtggagggtcatctagg
agctttgcacgaccaggtggtgacaattatgtttctcattccgaccggaaaaggaaaagt
gataattttgatagacgatcctatagtagtttaaaagaccctaggctagctgaagaccat
agtaatgatggatattcaaatgcagggagtgactcccatgggaagcactga
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