Argopecten irradians (bay scallop): 138334577
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Entry
138334577 CDS
T10542
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138334577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
airr03400
]
138334577
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
138334577
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
TPR_HPS5_insect
Motif
Other DBs
NCBI-GeneID:
138334577
NCBI-ProteinID:
XP_069139332
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All DBs
Position
1:complement(56356202..56386046)
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AA seq
929 aa
AA seq
DB search
MALQPKQELQLDGVQEQGFLSFHRSLPEKSSTTLRVFDRNDYYTVHGADAVFVAKDVYKT
AGVIKILGSGERKLESVVLSKMNFESLVRDLLLVRQYRVEVYRNKGGAKNNDWSLAFKAS
PGNLTQFEEILFGSTDMSTSAGVIAVKIGSDTGQRLVGVGYADATLRKFMVSEFMDNDQF
SNLEALIVQLGPKECLIMSGEIGADAGKLKQVLDRSGLLVTERKKSDFSSKDVIQDLNRL
LKFKKGEQGNSATLPETEKTQAMTSLSALIKYLELLSDEENFGQFSMSLFDLSQYMKLDA
AAVRALNLLPSAAEGGNKNQSILGLLNKCKTAQGQRLLSQWVKQPLVDLNKIEERLNVVQ
VFVEDTELRQTLQDEQLRKIPDFQRLAKKFQRKRATLQDCYRVYQAIDKMPYLLEVLEKH
EGEYQSLLMELFTNPAKELLMDFAKFQEMIETTMDLAQIENHDFVIKADFDEGLAALREK
IDELEDGIKGQMNKVARDLGIEPNKVLKLESNSQLGYFFRVTRKEEKALRNNKNYMTIDT
KKDGVRFHNNALRRMNEEYLKAKEDYNEQQKSVVMEIITIAAGYVEPMLMLNDIIAQLDV
LVSFAHVAVSAPVAYVRPKLLEKGSGNIQLTEARHPCLEMQDDVAFIPNDAKFEKDKQMF
HIITGPNMGGKSTYIRSVGVVVLMAQIGCYIPCAEGEITIVDSILARVGAGDSQLKGVST
FMAEMLETASILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIKAFCLFATHF
HELTALSDVVPTVNNLHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKNVIEFA
KNKASELEDFQNVSLSGTDLEGDSEPAVKKRKLAKEEGEDIIKDFLSKVKKLPLSTLSPD
EAITELSKLKACVKEKNNPYVEDVISRGK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcagccaaaacaagaattacaactcgatggtgtacaagagcaaggattcctt
tcctttcacagatctctgccagagaaatctagtacaactctccgagtttttgacagaaat
gactactacacagtacatggagcagatgcagtgtttgtcgccaaagatgtttacaaaaca
gctggtgtcatcaaaatacttggatcaggtgagcggaagcttgagtccgtggtgcttagt
aaaatgaactttgagtccttggtgcgtgatctgttgctggttcgacagtatcgtgtagag
gtgtacaggaacaagggtggtgctaagaataatgattggtctctggcattcaaggcctcc
cctggaaatctgacccagtttgaagagatcctgtttggaagtacagatatgtcgacatct
gcaggtgttatagctgtgaaaattggcagcgatacaggccaacggcttgttggagtaggg
tatgctgatgctactctccggaagttcatggtcagcgagttcatggataatgatcaattt
tctaaccttgaggctttaatagtccagctaggtccaaaggaatgtctaatcatgtcaggg
gagatcggtgctgatgctggaaaactgaaacaagtactagatcgaagtggcctgctggta
acagagcgtaaaaaatctgacttttcttcaaaagatgtcatacaagatttgaacaggcta
ttgaaattcaagaaaggagagcaaggaaatagtgctactttacctgagacagaaaagaca
caggcgatgacatccctgtctgctttgataaagtatttggagttgctgtcagatgaagaa
aactttggtcagtttagtatgtctttgtttgatttaagtcagtacatgaagctggatgcc
gctgctgtgagggccctaaacttgcttcccagcgcagcagaaggtggaaataagaaccag
agtattcttggattactgaacaagtgtaaaacagcccaaggtcagaggcttctgtcacag
tgggtgaaacaacccctggtggacctgaataaaattgaggagcgattgaatgttgtgcaa
gtattcgtggaggatacagaattaagacagacattacaggatgaacagctgagaaaaatt
ccagatttccagagattagccaagaaatttcaaagaaagagagccacattgcaggattgc
tatagagtgtaccaagccatagacaagatgccatacctgctggaggtattggagaaacat
gaaggggaatatcagtcattacttatggagctgttcactaacccagccaaggaattactg
atggattttgcaaagtttcaagagatgattgaaacaacaatggaccttgctcagatagaa
aaccatgattttgtaattaaggctgattttgatgaaggacttgcagctctaagagaaaag
attgatgagcttgaagatggtatcaaaggccagatgaataaggtagcaagagatttagga
atagaacctaacaaagtcctcaagcttgagagtaacagccaactgggatactttttcagg
gtcacacgcaaggaagaaaaggcactaagaaacaacaaaaactatatgacaattgataca
aagaaggacggcgttcgcttccacaacaatgccctgcgccgtatgaatgaagagtacctg
aaggctaaagaggactacaatgaacaacagaagagtgtggtgatggagatcattaccata
gcagcgggatatgtggaacctatgctcatgctgaatgatataattgctcagttggatgtt
ctcgtgagtttcgcccatgtggctgtctctgcaccagttgcttatgtacgaccaaagtta
ctagaaaaaggtagtggtaatatccagctgacagaggccagacacccttgtctggagatg
caggacgatgttgccttcatacccaatgatgcaaagtttgaaaaagacaagcaaatgttc
catataataactggtccaaatatgggaggaaaatcaacatacattcgttctgtaggagta
gtagttctgatggcacagatagggtgttacattccttgtgctgaaggggagatcaccatt
gtagacagcatactggcacgggtcggagcaggtgacagtcaactgaagggcgtatctaca
tttatggccgagatgttggagaccgcttctatccttaggtcagcaacagaagactctctg
attatcatagatgagttaggaagaggaacgtcaacctatgatgggtttggtttggcctgg
gcaatatcagaatacattgcaacaaagataaaggccttttgtctgtttgctacccatttc
cacgagctgacagcactttcagatgtggtgcccacagtcaataacctccatgtgactgcc
ctaacaaccaatgacactctcacattgctgtatagagtcaaaccaggtgtgtgtgatcag
agctttggaatccatgtggcagagctagctcactttccaaaaaatgttatagagtttgcc
aagaacaaagccagtgaactggaggatttccagaatgttagtctgtctggtacagacttg
gaaggggattcagaaccagctgtcaagaagcggaagctcgctaaagaggaaggggaggat
attatcaaagactttttatcaaaggtgaaaaaattgccattgtcaacattatctcctgac
gaagcaataactgaactcagcaaacttaaagcttgtgtgaaggaaaaaaataacccttat
gttgaggatgtaatttccagaggcaagtga
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