KEGG   Argopecten irradians (bay scallop): 138334630
Entry
138334630         CDS       T10542                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
airr  Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:airr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:airr03036]
    138334630
   03400 DNA repair and recombination proteins [BR:airr03400]
    138334630
Chromosome and associated proteins [BR:airr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    138334630
DNA repair and recombination proteins [BR:airr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     138334630
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_ECM29 HEAT_EZ HTH_48
Other DBs
NCBI-GeneID: 138334630
NCBI-ProteinID: XP_069139369
LinkDB
Position
11:complement(39533121..39563658)
AA seq 1014 aa
MLQSREILKVTFDPLKFSLYGRQAEEEGERNRAAIVTFCLRGLVLKLEPYPAFANLITDD
SLSLLELVEGLGVYLTSEETFERGRVVKLLADILYLLPTDKLTAKEIELLVAYLCDRLKD
HHSIQPPTLAGLLALCHAKHLPEGCPEKMCQSIFSEVQTQTLAQGDRQHVYNIFSVLLST
HLQELQKMGSDFVLGYIRAMDAEKDPRNLVLAFRCANIVIVSFPLGVFVEEMFEVVSCYF
PVDFTPPPGDPHGITKDDLILGLRGCLAATPQFGQFCCPLLLEKISSDVTSAKIDSFRTL
EAAAKVYGSKCLLEYKTSLFNCIKREVFGSGNSELETAALSALTAVSTTFSQDTIITDSQ
TCVEEFVSEVWDECSRYLGDDNLRLMASTCRLLCAVAAGSEVACSKVLSLVIPRLVQIFY
SHPQAFERNTVLKSIQTFLQVTRQFNIDTVKKLLAEFQTALYAVIMCALSESSVQLSATQ
CLDSFLQLPLTLEESDRQLLAKVLVDKIFKEEDKEVRSSYVTVLSTLAKTDVLTTKSVIL
PGLLEKLKPTETEVTCALQHERVFTALAAISVSLDILSMVVKELVNYLSALSRKSTNEAD
IKCVAGCLSDIFTAAVSCPDLLTFLYSQTLPELFSLLISMATDPSHHNSCVHNEAVLLFL
AACVYQVVLYLDKKKLTELYKNLTQVYLRNATEYLTCTMSTQFQPLQISSPWQQTQLMTL
VTPVICSCPMETSLDKALTGLYQKTAGPSGFYTSESLSQFLQTTCDKIYKILEDAEDSTK
TALNLLIWITKALAMRGHSKAKELMNKLSSLLEDTSLGEQAATGFAIILGDFPDIFSKAN
GSHIQMMYKQRVFVENLRKLQEGFQGSSPGTKKNYLICLSHMLNALPRQVFLSELPPLFP
LLVHSLQSDDLDLQLSTTTILCDLTHDAPDLISKHVDTLLPHLLQLCTQPSSMKIRIEAL
RLVSALSALPDHLLLRHKAKVVRRLEKVLDDKKRLVRKEAVTARSQWFLIGEPS
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgttacaaagcagggaaatacttaaggtgacattcgatccattgaaattcagtttatac
ggccgtcaggctgaggaagaaggagaaagaaatcgcgctgctattgtcactttttgtctg
cgaggactggtactgaaactggaaccgtatccggcttttgcaaacctaattacagatgac
agtctctctctattggaattagtagaaggcttaggggtatacctaaccagtgaggaaaca
tttgagcgtggcagagttgttaagcttcttgcagatatcctttaccttctaccgacagac
aagctcacagccaaagaaattgagctgctggtggcttatctttgtgacagattgaaggat
caccattccattcaacctccgacactagctggactactagcattatgtcatgctaaacat
ttgcctgagggatgtccagaaaagatgtgccaatccatttttagcgaagttcaaacccag
actctggcccagggagacagacaacatgtttacaatatcttttctgtcctcctctcaacc
catttacaggagttgcagaagatgggcagtgactttgtgttgggttacataagagctatg
gacgctgagaaggacccacgtaacctagtattggcctttcgctgtgcaaatattgtcata
gtcagctttccactaggtgtgtttgtagaggaaatgtttgaagttgtgtcctgttatttt
cctgtggactttactcctcccccaggtgacccccatggaatcactaaagacgaccttatt
cttggccttcgaggctgtctagccgctactccacagtttggtcaattctgctgtcctctg
ttgttggagaaaatttcctcggatgtgaccagcgccaaaattgactcctttaggactttg
gaagcagcagccaaggtgtatggatctaaatgtttgctggaatataagacgtctttattt
aactgtatcaaacgagaggttttcggatcggggaattcagaacttgagactgcggccctg
tcagcattgacagctgtatcgactacattttctcaggatacaattattacagatagccaa
acatgtgttgaggagtttgtgtccgaagtttgggatgaatgtagccgttacctgggggat
gataacttgcgcctgatggcctcaacatgtcggttactttgtgctgtggcagcagggtca
gaggtcgcctgttccaaagttctgtcattggtaatacctcgccttgtacagatcttctac
agccatccacaggcatttgagagaaacacagtcctgaaatcaatacagacgttccttcaa
gtcactcgacagttcaacatagatacagttaagaagttgttggctgagttccagacggcg
ttgtatgctgtgataatgtgcgccctgtccgagtctagtgtccaactgtctgctacacaa
tgtcttgactccttcctccagctacctttaacattggaggaatctgaccgtcagctgttg
gctaaagtcctagtggacaaaatatttaaagaagaggacaaggaggttagatccagttat
gtaactgtcctgtccactctggcaaaaactgatgtattaacaacgaaatctgtcatattg
cctggtctcctcgagaaattgaaaccaacagagactgaagtgacctgtgctctacagcat
gagagggtgttcacagccctggcggccatttctgtatcactagacatcttaagtatggta
gtcaaggagctcgtcaactatctctctgccttgtcacgaaagtctaccaatgaggcagat
ataaagtgtgtggccggttgtttatcggacatcttcactgctgctgtctcttgcccagac
ctgctcaccttcctctatagtcaaaccttaccggaactcttcagtctccttatctccatg
gcaaccgatcctagtcatcacaacagctgtgtacacaatgaagccgtactcttgtttctg
gccgcctgtgtgtaccaggtggtcttatatctagataaaaagaaattgacggagttgtac
aaaaatttgactcaagtttacctacgtaatgccacagaataccttacatgtacaatgtct
acacagtttcaaccactacagatttcatcgccatggcaacagacacagttgatgacactt
gtaacgccagttatatgttcctgtcccatggagacgagccttgacaaagccctcacaggc
ctgtatcaaaaaactgcaggtccgtcaggattttatacaagcgaaagtctttcccagttc
ctccagaccacgtgtgataagatatataaaattctggaagatgcggaagatagcacaaaa
acggcacttaatctgttaatctggatcaccaaagctcttgctatgaggggtcatagtaaa
gcaaaggaactaatgaacaagctctctagcctactggaggacacaagtctaggagaacag
gctgccacaggttttgcgatcattttaggtgattttcctgacatattctctaaagccaac
ggatctcacatacaaatgatgtataagcagagggtgtttgtggaaaacttacggaaactt
caagaaggatttcagggttcctctcctggtacaaagaagaactacctgatttgtctgtcc
cacatgctgaatgccctgccaagacaagtgttcctaagtgagctacctccactattcccg
ttactggtgcactccttgcagtctgatgaccttgaccttcagttgtccaccacgacgata
ctatgtgaccttacccatgatgcaccagatctgatatctaaacatgtggacacactttta
ccacatttactccagctgtgtacacaaccttcgtcaatgaaaatccgaatagaagctcta
cgattggtaagtgccctatctgccttgcctgaccatttgctgttgcgacataaagctaaa
gttgtgcgacgactggagaaagtccttgacgataagaaaagactggttaggaaggaggct
gttactgctcgctcacagtggtttttgatcggagaaccaagttga

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