Argopecten irradians (bay scallop): 138334937
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Entry
138334937 CDS
T10542
Name
(RefSeq) pseudouridylate synthase 1 homolog isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
airr03016
]
138334937
Enzymes [BR:
airr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
138334937
Transfer RNA biogenesis [BR:
airr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
138334937
Prokaryotic type
138334937
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ACR_tran
Motif
Other DBs
NCBI-GeneID:
138334937
NCBI-ProteinID:
XP_069139905
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All DBs
Position
11:19856576..19877891
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AA seq
517 aa
AA seq
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MLKHWIHLLRGYSKHLIKFQTPKMSESVVTDVKKVVTQELASSPEVTGQKRKLENEDVAS
SSKKEKIDHDAEDNKDSATLKRKKVALLISYSGKGYFGLQMQKTQVPTIEGVIVKALHDV
GVISQEDADTPQKVRFQRAARTDKGVSAAGNIVSLKMSVHLENFLEEISQVLPQHIKVQA
CIRTTKGFDCKNYCDGRTYSYLTPTFAFAPHKLAVTERYRVPGDTIERVRELIKRFEGTH
NFHNFTSGLKPNEAKAKRYIISFKCGEPFVRDDIEFVQLTVRGQSFMLHQIRKMIGITMA
IVRGHCGEEVIDKTYSLIKVDVPKAPGSGLLLEELHYQNYNKRYGNDGVHQSLDAAIYRE
AIDQFKEEYIYPEMIRSEKEERSMMTWLNTLENHDYDEIPAEKLLNWKYNENKEEGKNEN
STNSPEPSGMENENSTNSPEPSELKDIKDSSSENGNKDQVDSNNTEKVPEESTTDKDMAQ
SSDNVKDMAQSSENVKDTVQSSDNVKDTDKGNKMEVS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacattggatccatctacttcgaggttactccaagcatttgatcaaattccaa
acaccgaagatgtctgagtctgtggtcactgatgtgaaaaaggtcgtcacacaagagtta
gcttcttcaccagaagtcactggccaaaaaagaaaactagaaaatgaagatgtggcaagc
tcatctaagaaggaaaaaatagaccatgatgccgaggataataaagattcagccacattg
aaaaggaaaaaggtagcactgctcatctcctacagtggtaaaggatattttggccttcag
atgcagaagactcaagtgccaacaattgaaggagtgatagtaaaggcactacacgatgtg
ggtgtgatatcacaggaagatgctgatacgccacaaaaggttcggttccaacgagctgcc
cgaacagacaaaggggtttcagcagcaggaaatattgtctccctaaagatgtctgtacat
ctggagaactttttagaggagatcagtcaagtgttaccacagcatattaaggtccaggcc
tgtataaggactaccaaggggtttgactgtaagaactactgtgacgggaggacctacagt
taccttacacccacgttcgccttcgctcctcataaactggcagttacagaacggtaccga
gtcccaggtgacaccattgaaagagttcgggaattgataaagagatttgagggcacacat
aacttccacaatttcacctcaggactgaagccaaatgaagccaaagctaaacggtacatc
atcagttttaagtgtggtgagccttttgtgcgagatgacattgagtttgtacagctgact
gttcgaggacaaagcttcatgcttcatcaaatccgtaaaatgattggtataactatggct
atcgtaagaggtcactgtggtgaagaagtgatagacaagacttactctctcattaaggtt
gatgtgccgaaggcgccagggagtggtctattgttggaagagttacattatcagaactac
aataagaggtatggaaatgacggcgttcaccaatctctggacgctgccatttacagggaa
gctatagatcagtttaaagaagagtatatctatccggaaatgatcaggtcagaaaaggaa
gaacggtccatgatgacatggctgaatacactagagaatcatgactatgatgaaataccc
gcagaaaaactgttaaactggaaatacaacgagaataaagaagaaggtaaaaacgaaaac
tccactaatagtccagaaccatcaggtatggaaaacgaaaactccactaatagtccagaa
ccatcagagttaaaggacatcaaagactcttcttctgaaaatggaaacaaggaccaagta
gattccaataatactgagaaagtccccgaagaatctacaacagacaaggacatggctcag
agttcagacaatgtcaaggacatggctcagagttcagaaaatgtcaaggacaccgtacaa
agttcagacaatgtcaaggacacagataaaggtaacaaaatggaggtttcttga
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