Argopecten irradians (bay scallop): 138335039
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Entry
138335039 CDS
T10542
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138335039
Enzymes [BR:
airr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138335039
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138335039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_4
Prok-RING_4
zf-Nse
zf-Vps39_C
zf-C3HC4_4
TRAF3_RING
zf-UDP
Zn_ribbon_6
DUF7674
zf-ANAPC11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
138335039
NCBI-ProteinID:
XP_069140038
LinkDB
All DBs
Position
11:complement(22762255..22770535)
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AA seq
194 aa
AA seq
DB search
MSTRIRDDRSRARRRQRREMSAGRRPLRSRIVLNNTENTNDVEIISSQPNRSCIDLTSDT
GNDFIDLTSPIATNAPSHHNTTDESVLFVGEESVLDLSGDLLVEEDDEVAEAVENLFTPD
LDDSIASLPGNRKVTCPVCLDSDERITRSGRQLNSTTCGHIFCNECIEGAIRSQKRCPTC
RKTLSRRQIHPIFL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaagaataagagatgatcggtctcgcgcccgtcgccgccagagaagagagatg
tctgcaggcagaagacctcttcgttcacggatagttttaaataacactgaaaacactaat
gatgtagagataatttcttcacaaccgaacaggagctgtattgaccttacaagtgacact
ggcaatgattttattgaccttaccagtcccatcgctacaaatgctccaagtcatcataac
acaacagatgaatcggtcctttttgtcggcgaggagtctgtccttgacctgtctggtgac
ttgttggtagaagaggatgatgaagtggctgaagcagttgagaacctgttcacacctgac
ctggatgattccatagcatccttacctggtaatagaaaggttacctgtcctgtgtgcctc
gacagtgatgaacggataacaagaagtggtcgtcagcttaattcaacgacatgtggacat
atcttctgtaatgagtgtattgaaggtgccatccggtcccaaaaacgctgtccgacttgt
cggaagacactatctcgacgacagattcacccaatttttctatga
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