Argopecten irradians (bay scallop): 138335170
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Entry
138335170 CDS
T10542
Name
(RefSeq) DNA polymerase nu-like
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
138335170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
airr03400
]
138335170
Enzymes [BR:
airr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
138335170
DNA repair and recombination proteins [BR:
airr03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
138335170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Herpes_Pol_N
HTH_cyano
Motif
Other DBs
NCBI-GeneID:
138335170
NCBI-ProteinID:
XP_069140238
LinkDB
All DBs
Position
11:27514132..27534743
Genome browser
AA seq
1025 aa
AA seq
DB search
MCPVWRPVSAPPQLERFCHLSADAQTVMAGIYRQYNEQRKQLAAKTQQQKGTYYQEMYER
RFWAPPCVDTSSPQTMNTRVLPGHVQSSSSLEMNDLDLDAFSEKLEVMCRNPNSDSVTEN
QYESFSKNSQSSSTLSRNLSLKDTDKDQICTFPNITFPNSDKEMPIQKEQICTFPNTTFP
NSDREMPILKEQICTFPNITLEDSNTDMAIQQNLHVHDNERTNWATPLNKKIDSNPEKES
VVHEDLSDVTLENHFLKSTASTLTIKGTQKENSREKNIIIPKRTSSISARLKQHMTIRKD
LQMKQNQKDCSKRVISSPKRPTMISFADSNKESSHFSIPYKKQKQDVTEREVPIVKTHEP
QGMLPFSKQHTACDVATLRDQDLREVLQTLLSSSEVLICLVYKNGSTQLRDTTTAPNKRK
SAGNSRQKQRTSEVQAVAVCGCKGSTGLSQEDKVWLFPVPDQNHTEHTQIKEFWKELLLN
QHRKICCDAKMLLVVLMRGFGIKDFKGVTVFDPIVAAWLMDPDCENVTFQKSLSLVCLIL
KDNVLSSAVELLKEDLCLLSELMRRLYQKLISRDQWDLYCCVEMKLLPLLAAMELRPLRI
DVDTMLRFSNILKRKLQKLEKNAHEAAGHPFLINSPAQLRQVLFEELKLDKKLPGNRRLA
KTNIGHQISTSEAVLNQLVDTHHLPGIILEYRQVQKLKSTYVDGMMSCVQDGYISTHWDQ
TSAATGRLSSYQPNIQAIPKTSTVISDFTDNFIIGKKRGDTVEIFARDSFISHDGWSFLS
ADFQQIELRLLAHLADDPTLLKIFTNAESGSKDIFIELTTQWLCKPVSLVTTQEREQTKR
VVYSVMYGAGKDRLAEYLKMSSSDAKAIIDSFLVKFPAVNQFSKKCVEFCQKNGFTTTIF
KRRRLIPNIKSPSPVLRAQAERQAVNFCVQGSAADLCKAAMIQVEHTLQSHAHLKARLVV
QIHDELLLEVLDEDLNAIRSLVQTVMEDEAALCGNMVSLKVPIKVSLSAGKTWGHLSPLD
SGKML
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccagtttggagaccagtctcggcacctcctcagttagaacgtttctgtcaccta
tcagctgatgcccagactgtgatggcaggaatttacagacaatacaatgaacaaaggaaa
caacttgctgccaaaactcaacaacaaaaagggacatattaccaggaaatgtatgaaagg
agattttgggcaccgccttgtgtcgacactagttcaccacaaaccatgaatacaagagtg
ttaccaggacatgtacagtcttcttcttccttagaaatgaatgaccttgacctagatgcc
ttctcagaaaagttggaggtcatgtgcagaaatccaaattccgattcagtaacagaaaat
caatatgaatccttcagtaaaaatagccagtcatcatccacattatctagaaatttgagt
ttaaaagacacagataaagaccaaatttgcacatttccaaatatcactttccccaattct
gataaagaaatgccaattcaaaaagagcaaatctgcacatttccaaataccactttccca
aattctgatagagaaatgccaattctaaaagagcaaatttgcacatttccaaatatcact
ttagaggattcaaatacagacatggcaattcaacaaaatctacatgtacatgacaatgaa
cgtacaaattgggctaccccattgaacaaaaaaattgattcaaatcctgaaaaggaaagt
gttgtacatgaagatttatcagatgttacactagaaaatcactttctaaaatctacagcc
tctactttgacaataaaaggaacacagaaagaaaattcaagggagaaaaacatcatcata
ccaaaaaggacatcttctatttcagccagactgaaacaacatatgacaataaggaaagat
ttacagatgaaacaaaatcaaaaagattgttctaagagagtcatttcctcaccaaagaga
ccgactatgatcagctttgcggattccaacaaggaatcttcacacttcagtatcccttac
aaaaaacagaagcaggatgtgactgagcgggaagttcctatagtaaagactcatgaacca
caagggatgttaccattcagtaagcaacatacagcttgtgatgtggcaacattgagagac
caggacctcagggaagtcctccaaactttactctcttcatctgaagtactcatttgtctt
gtgtataaaaatggctctacacagctaagggacactaccactgctccaaataagagaaaa
agtgcaggaaattccagacagaagcaacggacatctgaggtccaggctgtagcggtatgt
ggatgtaagggaagtacaggactgtctcaggaggacaaagtttggctgtttcctgtcccg
gaccaaaaccacacagaacatacacagataaaagagttctggaaagagttattattaaac
caacaccggaagatttgctgtgatgccaagatgttactagttgtattgatgagaggtttt
ggaatcaaagactttaaaggagtcactgtctttgatcccattgtggcagcttggttgatg
gatcctgattgtgaaaatgtgacttttcagaaaagtttgtccctggtttgtctaattttg
aaggacaatgtgttgagcagtgctgtagaactattgaaggaggatctgtgtctactgtcg
gagctaatgaggcgtctgtaccagaagttgatatctagagaccagtgggacctatactgc
tgtgtggaaatgaaactactgcctctcctggcagctatggaactccgaccactccgaata
gatgtggacaccatgcttaggttctctaatattctcaagaggaagctgcagaagttagaa
aaaaatgcccatgaggcagcaggtcacccgttccttatcaacagtccagcacagctacgt
caggtgttgtttgaggaactaaaacttgacaagaagttaccagggaatagaagattagct
aagacaaacatcggccaccaaatatctacgtcagaagcggtactaaaccagttagtggac
acacaccacctcccagggattatactggagtacagacaggtacagaagctgaagtcgacg
tatgtcgatggtatgatgtcctgtgtacaggatggctatatctccactcactgggatcag
acatcagcagccactgggcgtctctcgtcttaccaacccaatatacaggccatcccaaaa
acctccaccgtcatatcggatttcacagataacttcattattggtaagaaaagaggtgac
actgtagaaatatttgcaagggattcctttatcagtcatgatggctggagtttcctttca
gcagatttccagcagattgagctgcgtcttctagcccatttagcggatgaccctacattg
ttgaagatatttaccaatgctgaatctggaagcaaggatatctttatagagctgacaaca
caatggttgtgtaagcctgttagcctggtgacaacacaggagagagaacagaccaagaga
gttgtctactctgtcatgtatggtgcagggaaggacagactagcagaatacctcaagatg
tcctccagtgatgctaaagccatcatagatagctttttggttaagttccctgctgtcaac
cagttttcaaagaaatgtgtggaattctgtcagaaaaatggcttcacaaccacaattttc
aaaaggcgacgacttataccaaatatcaagtctccatcaccagttttacgagcccaggcg
gagagacaagcggtaaacttctgtgtacaaggttcagctgctgatttatgtaaagctgct
atgatacaggtggagcacaccttacaaagccatgcacatcttaaagccagattggtcgtg
caaatccatgatgaactgttattagaagtattggatgaagatctgaacgccatcagaagt
ctggttcaaactgtaatggaagatgaagccgctctctgtggtaacatggtgtcactcaaa
gttcccatcaaagtttccctgagtgcaggcaagacctggggtcatctttctccactggat
tcagggaaaatgttgtaa
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