Argopecten irradians (bay scallop): 138335227
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Entry
138335227 CDS
T10542
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
airr04054
]
138335227
Pattern recognition receptors [BR:
airr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
138335227
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GFIT
Motif
Pfam:
LRR_8
TIR_2
LRR_9
TIR
LRR_4
Glyco_hydro_59M
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
138335227
NCBI-ProteinID:
XP_069140315
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Position
11:complement(29181784..29187315)
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AA seq
826 aa
AA seq
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MADAKLLFTLCVLVQTFHPSDCVPVCCNIRELTRESHVICSGCRLLVVPYDLPTNTTALD
LSNNNITVLKRDSFPTLPLLKTLYLRANRITRILSGVFEDLSNIEELDLSNNQHDHMSLD
LDIFEPLKKLTNLKIQKNNFHLIKAYPENALSTLSNLKLLFMDIFDGFYFGDSFSSLEML
QGLELTSPNMDSLSIVNASFLGLRGSNITQLSIHGNIRNIEKNFLSPFNALRVFKIHAFG
SRMDIHNALRGLYGLRGRKMNEIYMKGFKERFTKGYDLTKKDVTYLGSICVTKLSIIESG
LSTISTNTMTAWTTKKCIKVLDVSWNMFNSPQMFSLVVLFSSLTHLDCTNTRNRGTSKRS
ISFHRERTLFLPENLIYMNCSFSRISGSLNNVRFERHNKLEVLNISYPNGHSSCPSNIIK
GLPHLKVLDVSGFKCSSPNPWMFSVLPNLSRXVARKCDLGEVFATNSAFFMGLYNLSFLD
ISSNNINTFNIDLFNDQMNSLKTLELDGNYLSGIPYNLLRKLIKLQKLDMSNNFLSTVNH
SEYSCLEELKSKSDDFQISLFGNPFVCNCEHLDFLSWLRLTNVIYKKDELVCSTSEGNLL
KIVEFLESFDQFKDHCVSQTWLIISIIFTVVFFVLGILTREAWRRSVWLRVMCRVPAGNI
AYTNDIFISYCNEDSSWVAKTLAPWLDDNEIEYFCEDKGFTPGRDIADNIMDAIDSSRQT
VFVVSYASLQREWTTFTMRLTYEYSFRVERENMNIFVLLNNIQKSEIPKLMRNNWETIGP
LRWPNKSNTTLDKLTGAQTKFWEKLSSRIVRRNGDFNSKHETESSL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcaaagctcctattcacattatgtgtactagttcagaccttccatccttcg
gattgtgttccggtctgctgtaacatccgggaattaacaagagagagtcacgtgatatgt
tcgggatgccgcctgcttgttgtaccttacgatttacctacaaatacgactgctttggat
ctaagtaacaacaatataactgttttgaagagagactcattcccaacgcttccactatta
aagaccttgtatcttcgagcaaaccgtatcactcgaatcttatccggagtatttgaggat
ctttctaatattgaggaacttgatctctcgaacaaccaacacgatcatatgtcattggac
cttgacattttcgaacctttgaaaaaacttacaaatttaaaaattcagaaaaataatttt
catttgatcaaagcctaccctgaaaacgctctttcgacactaagtaatcttaaactctta
ttcatggatattttcgacggattttattttggtgattcattttcctcccttgaaatgttg
caaggattagagctaacttcacctaacatggacagcctgtctattgttaatgcttcattt
ctaggtttaagaggatcaaacataacgcaacttagcatacatggcaacattagaaatata
gagaaaaactttttatccccattcaacgccttaagggtatttaagattcatgcttttggt
tcgcgaatggatattcataacgctcttcgtggactatatggactgagagggagaaaaatg
aatgaaatatacatgaaaggatttaaggaacgtttcacaaaaggctatgacctaacgaaa
aaagatgtgacttatctgggatctatatgtgttacaaaattatcaataattgagtctggt
ctatctacaatcagcaccaataccatgactgcttggaccactaagaagtgtatcaaggtt
ttagatgtgtcttggaacatgtttaattcaccacagatgttttctttagtagttcttttc
tcatcgcttacacacctggattgtacaaatactcgcaacaggggtaccagtaagaggagt
atttcattccatcgggaacggactctttttcttccagagaatcttatttatatgaactgt
tctttttccagaatatctggatcgttgaacaatgttagatttgaaagacataacaaactt
gaggtgctaaatattagttatccaaacggccattcgtcatgtccttcaaatataataaaa
ggacttccccatttaaaggtgttagatgtgtctggatttaagtgttcatcaccaaaccca
tggatgttttccgtacttccgaatctatcgcganccgtcgccagaaaatgtgatctcgga
gaagtgtttgcaacaaactccgcgttcttcatgggcctgtataatctttccttcctcgat
atttcttccaataatattaacacctttaatattgacttgttcaatgatcaaatgaattct
ctcaaaaccctagagctggatgggaactatcttagtggaattccatataacctacttcga
aaattaatcaagttacagaaactagatatgagtaataatttcttgtctacagtaaaccat
tctgaatattcttgtctggaggaactgaaatcgaaatcggatgatttccaaatttcgtta
ttcgggaatccattcgtgtgtaattgtgaacacttggattttctctcttggttaagattg
acaaatgttatatacaaaaaagatgaattggtgtgttcaacgtcagaaggcaacctattg
aagatcgttgaattcttggaatcatttgatcaatttaaagaccactgtgtttcgcaaaca
tggcttatcatatcaattatctttaccgtggttttctttgtgctgggtatccttacgaga
gaggcatggcgacgcagtgtgtggttacgagttatgtgccgtgttcctgcaggaaacata
gcatatacaaatgatatctttatatcttattgtaacgaagattctagctgggttgcgaaa
acattagctccgtggttagatgataacgaaattgaatacttctgtgaggataaaggtttt
acaccaggacgagacatagctgataacatcatggacgctatagactcatcacgtcaaact
gtatttgttgtaagctatgcttctttacaacgagaatggacaacatttactatgagatta
acttatgaatattcatttcgtgttgaacgagaaaatatgaatatttttgttttgttaaac
aatatacaaaagagcgaaattcccaaactgatgcggaacaactgggaaaccatcggtcct
ttacgatggccaaataaaagtaatacaactttggacaaattaactggagcacaaaccaag
ttctgggagaaattgtcaagtcggattgtaagacgaaatggtgacttcaattccaaacat
gaaacagagtcatctttataa
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