Argopecten irradians (bay scallop): 138335229
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Entry
138335229 CDS
T10542
Name
(RefSeq) toll-like receptor 3
KO
K10160
toll-like receptor 4
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04145
Phagosome
airr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138335229
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138335229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
airr04131
]
138335229
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
airr04054
]
138335229
04090 CD molecules [BR:
airr04090
]
138335229
00536 Glycosaminoglycan binding proteins [BR:
airr00536
]
138335229
Membrane trafficking [BR:
airr04131
]
Endocytosis
Phagocytosis
Toll-like receptors
138335229
Pattern recognition receptors [BR:
airr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
138335229
CD molecules [BR:
airr04090
]
Proteins
138335229
Glycosaminoglycan binding proteins [BR:
airr00536
]
Hyaluronan
Cell surface receptors
138335229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
LRR_5
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
138335229
NCBI-ProteinID:
XP_069140320
LinkDB
All DBs
Position
11:complement(29204018..29207834)
Genome browser
AA seq
824 aa
AA seq
DB search
MADTKLLLTLCILLRTFPPSDALPVCCNTIEMPGETHVICSGCRLLGVPKDLPSNTTVLD
LSNNNLASLERHTFPDLQMLKILYLQRNKLVRITSGAFDNVPNIEKLDLTDNKLEQSSID
MNVFEILKKLRTLKIQGNNFHISKVYPEQALSSISNLIVLAMDIFEGFVFGNGFWNQTSL
QHLYLSFQGNGTVTLLNDSFDGLKRSNIKVLSIAAPFRKIETNTLASFGNLIKLKWENIA
YTLTIHDALEGLYGIRGRTMNSLSIIGFRYRFTNGEGLRKSDMFNLGTICVKKLYLIGNA
ISTIGIDVMTAWTSKTCIKELDLSKNMFYLPQPLTLLGLFSSLTRLLIRHTAMRIFRKRS
TFMRERAFFLPTNLTYVDIVDNPLSGYIVNITIAKNNLTVLKIGYPKNFRCEYGLIKGLV
HLRELDMTGIDCSEVNPNMFTETPLLSRLTARQCNIERVLSRNTPAIFKGLHHLSILDVS
SNNLHFIHKHLLADQKKTLKQLNLSGNHMDRIPTEILHNLTVLENLDISNNSISTLNYSQ
YTLLDEFKIKSIDFQIVLHGNPLLCNCENLDFLSWVEATDVIYKKRELLCMTSEGIRVPI
AELLEHFDQFKDHCVSQTWLIVSVTITMIVIVLVILTREAWRRSVWLRVWCRYPMEDTKY
TNDIYISYSDEDQSWVREKIAPWFDEKQIKYCCEDKSFNLGRDIADNIMDAIDSSRQTVF
VVSYASLEREWLLFTMRLTCEYSFRVGRENMNIFILLNDIKKSEFPKLIRNNWKIIRPLR
WPNKSNTTLDKLTGAQTKFWEKLSSRIVRRNCDFKSEHETESSL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacaaagctcctacttacgttatgtatactactgcggaccttccctccctcg
gatgcacttccggtttgctgtaacaccattgaaatgcctggagagacccacgtgatatgt
tccggatgtcgtctgcttggtgtacctaaggatttaccgtcaaatacaacagttttggat
ctaagtaacaacaatctagcttctctagaacggcatacatttccggatcttcaaatgtta
aagatattgtatcttcaaagaaacaaactagtaaggatcacatccggagcattcgataac
gttcctaatattgagaaacttgatctcacagacaacaaattagaacaatcttcaattgat
atgaatgtcttcgaaattctgaaaaagctaaggacattaaaaatccaaggaaacaacttc
catattagtaaagtatatccagaacaggctttgtcatccatttctaatcttattgtcctt
gctatggatatctttgagggttttgtgtttggtaacggattttggaatcaaacatcttta
caacacttatacttatcctttcaaggcaatggtaccgtgactttgttaaacgattcattt
gacggtctcaaaagatcaaacattaaagtattaagtatcgcagcacctttccgaaagatt
gaaactaacacacttgcttcgttcggaaatcttatcaaattgaaatgggaaaatatagca
tacactttgactatccatgatgctcttgagggactttacgggatcagaggaagaacaatg
aattcactttcaatcatagggtttcgatatcgatttaccaacggtgagggtctaaggaaa
tcagatatgtttaacctgggaacaatttgtgtaaagaaactttatctgatcggtaatgct
atttcaacaataggcatagatgtaatgaccgcatggacttctaaaacatgcattaaggaa
ttagatttgtcaaaaaatatgttctatttgccacaaccacttactctattggggcttttc
agttcattaactcgcctactaatcagacatactgcgatgagaatttttcgaaagcggagt
acttttatgagagaaagagcatttttcttacccacaaatcttacgtatgtagacattgtt
gacaatccgttatcagggtatatagtaaatattactatagcaaaaaataacctgactgtg
ttgaagataggttatcctaagaattttagatgtgaatatggacttatcaaaggtctggtc
cacttaagggaacttgacatgactggaatcgactgttcggaagtaaatccaaatatgttt
acagaaacgcctcttctgtctcggttgactgccaggcaatgtaatatcgaacgcgtcctt
agtcggaacacacctgcaatatttaaaggacttcatcatctgtctatacttgatgtttcc
tcaaataacctgcatttcatacataaacatctgttagcagaccagaagaaaactctcaaa
caactaaacctttctggaaatcacatggaccggattcctacagagatattacataattta
acggtattagagaatcttgatattagcaataattccataagtacattaaattattcccaa
tatacattacttgatgaatttaaaattaaatcgattgatttccaaattgttttacatggg
aatcctttattgtgtaactgtgaaaatttagatttcctttcgtgggtagaagccactgat
gtgatatacaaaaagcgagaacttttatgtatgacttcagaaggaattcgggtaccgatt
gcagaattactagaacatttcgatcaattcaaagatcattgtgtttctcaaacatggctt
atcgtttctgttactataacaatgattgtcattgtgcttgttattctaacgagagaggcg
tggcgacgtagtgtgtggttacgagtgtggtgtcgttatccgatggaagatacaaaatac
acaaatgacatctatatctcatatagcgacgaagatcagagttgggtgagggaaaaaata
gcaccttggtttgatgagaaacaaattaaatattgctgtgaagataaaagttttaactta
ggacgagatatagctgataacatcatggacgctatagactcatcacgtcaaactgtattt
gttgttagttatgcttcattagaacgagagtggctacttttcaccatgaggttaacttgt
gaatattcatttcgtgttggacgagaaaatatgaatatttttattttgttaaacgatata
aaaaagagcgaattccctaaacttatccggaacaactggaaaataatccgtcctttacga
tggccaaataaaagtaacacaactttggacaaattgactggagctcaaaccaagttctgg
gagaaattgtcaagtcggattgtaagacgaaattgtgacttcaagtccgaacatgaaaca
gagtcatctttgtaa
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