Argopecten irradians (bay scallop): 138335238
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Entry
138335238 CDS
T10542
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138335238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
airr04054
]
138335238
04090 CD molecules [BR:
airr04090
]
138335238
Pattern recognition receptors [BR:
airr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
138335238
CD molecules [BR:
airr04090
]
Proteins
138335238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_9
LRR_5
LRR_Zer-1
LRR_EndoS
CRIM1_C
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
138335238
NCBI-ProteinID:
XP_069140330
LinkDB
All DBs
Position
11:29343217..29362608
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AA seq
712 aa
AA seq
DB search
MIQNSRITQLVCLPSLIHLLQRRSDIKEFVTITCVFLTCVWQNPDGFPVCCNTLEMPGET
NVICSGCRLLVVPKDLPTNTTVLDLSNNYFTSHERDSFPYLPLLSKLYLRKKNLVRITSR
AFDNVPNIEYLDLTDNKLEQLSMDMNVFETLNKLKKLRIDRNNFHISKAYPGQALSSISN
LEFLILDIFEGFVFGNEFFNQTCLQHLYLYFQGKGTVSLLNNSFDGLERSNIKVLSITAP
FRKIETNTFAPFRNLTTLIWRTLAITLSINDALRGLYGVRERTMDSLSIRGFRYKFTTGE
DLRKSDMFNLGTICVKKLHLIGNAIALIGTDAITSWSTKTCIEEIDVSENMFYLPQQLTT
MGLFRSLTRLLVRHTVMRIFRKRSTFSRKRTVFLPTNLTYVDFTDNTLNGYTFNMTISKN
NLTVLKIGYSNKNFRCSYGLVKGLVHLKELDISGVDCSQVHPNMFAGMPLLSRLTARQCN
IERVLSQNTPALFKRLHNLSIIDLSSNNLHFIHKHLLADQKKTLKQLNLSGNHMDQIPTE
ILHNLTVLENLDISNNSISTLNYSQYTLLDEFKIKSIDFQIVLHGNPLVCTCEHLDFLSW
VEATDVIYKKRELLCMTSEGIEIPIAELLETFDQFKDQCVSITWLIVSVTIICIIFMLGI
LTREVLRRSVWLRVLCRHPTEATKYTNDIVISYCDEDRSWVRDTLAPWYDEK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatacagaatagtcgtattacgcagttggtttgcctgccatctttaattcatttatta
cagcgcagaagtgatatcaaagaattcgtcaccataacctgtgttttcttgacttgtgta
tggcaaaatccagatggatttccggtatgctgcaacacccttgaaatgccaggagagacc
aacgtgatatgttccggatgtcgtctgctcgttgtacctaaggatttaccgacaaatacg
acagttttggatctaagtaacaactattttacttctcatgaacgggattcatttccgtat
cttccactgttatccaaattgtatcttcgaaaaaaaaacctggtgagaatcacgtccaga
gcattcgataacgtccctaatattgagtaccttgatctcactgacaacaaattagaacag
ttatccatggacatgaatgtcttcgaaactctgaacaaactaaagaaattaagaattgat
aggaacaacttccatattagtaaagcatatccaggacaggctttatcatccatttcaaat
cttgaattccttattttggacatttttgaaggatttgtgtttggaaacgagttttttaac
caaacatgtttacaacacttatacctatacttccaaggcaaaggcaccgtgtcgttgtta
aacaattcatttgacggtctcgaaagatcaaatataaaagtactaagtatcacagcacct
ttccgaaagatcgaaacaaacacatttgctccatttagaaatcttaccacattaatatgg
agaactttagcaatcactttgtctatcaatgatgcgcttcggggactttacggagtcaga
gaaagaacaatggattcactttcaatcagaggatttcgatataaatttactactggcgag
gatctacggaaatctgatatgtttaacctgggaacaatttgtgtaaagaaacttcatctg
attggtaatgctatcgcattaataggcacagatgccataacctcatggagtactaaaaca
tgcattgaggaaatagatgtttcagaaaatatgttctatttaccacaacaacttacaacg
atgggtcttttccgttcattgactcgcctactagtaaggcatactgtgatgagaattttt
cgaaaacgaagtacctttagtagaaaaagaacagtattcttaccaaccaatcttacgtat
gtggattttactgacaatacgttaaatggatatacatttaatatgactataagcaaaaat
aatctgactgtgttgaagataggttattctaataagaattttagatgttcatatggactt
gtcaaaggtctggtccatttaaaggaattagacatatccggagtcgactgttcacaagtt
catccaaatatgtttgcaggaatgcctcttctctctcggctaactgctaggcagtgtaat
atcgaacgcgtccttagtcagaacacacccgcattattcaaaagacttcataatctgtct
atcatcgacctttcctccaataacctgcatttcatacataaacatctgttagcagaccag
aagaaaactcttaaacaactaaacctttctggaaatcacatggaccagattcctacagag
atattacataatttaacagtattagagaatcttgatattagcaataattccataagtaca
ttaaattattcccaatatacattacttgatgaatttaaaattaaatcgattgatttccaa
attgttttacatgggaatcctttagtatgtacctgtgaacatttagatttcctatcgtgg
gtagaagccactgatgtgatatataaaaagcgagaacttttatgtatgacttcagaagga
attgagataccgatagcagagttactggaaactttcgatcaattcaaagatcaatgtgtt
tctataacatggcttatcgtgtctgtaactataatctgtataatctttatgcttggtatt
ctaacaagagaggtattgcgacgtagtgtgtggttacgagtgttgtgccgtcatcctacg
gaagctacaaaatacacaaatgatatcgttatctcatattgcgacgaagatcggagttgg
gtgagagatacattagcaccctggtatgatgaaaaatga
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