Argopecten irradians (bay scallop): 138335491
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Entry
138335491 CDS
T10542
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
airr03036
]
138335491
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
airr00535
]
138335491
Chromosome and associated proteins [BR:
airr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
138335491
Meiosis-specific proteins
Cohesin complex and associated proteins
138335491
Proteoglycans [BR:
airr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
138335491
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
TMF_DNA_bd
AAA_29
MFD_D3
Motif
Other DBs
NCBI-GeneID:
138335491
NCBI-ProteinID:
XP_069140705
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All DBs
Position
11:38071076..38101602
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AA seq
1206 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVEPFSPKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RQALLHEGTGPRVISAFVEIIFDNSDNRIPIEKDEVVLRRVIGSKKDQYFLDKKMVTKGD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTKVYDERKEESKVILR
ESEGKREKINDLLKYIEERLATLEEEKEELKEYQKWDKMRRSLEYTIHDHELRDTRKKLD
DLQEKRETSGVQTQKLRDSQQNANDKVKAINKDLRELKTRMQTILDEKEQIASENQDLTK
RKAKLELNIKDILDDLEGDKKARKKTEEEQKKVNERIAKTQASLEAITPQYEAQQSREEN
CTQQLSLAEQRRKELYAKQGRGNQFTSRDERDNWIKKELKSLNRAIKDKEEQIKRLREDL
TNDTKRAEHLKVNIQDISSKTDQNKDIIDQNQRSSSDMKKEKETIHNERNAMWRQENLMQ
QELVGIREELSKKEQALRSMTGKAILNGIDSVQKVIQSFRDQRKFPEVCDGYLGIMIENL
DCDKAFFTCVEVTAGSRLFHHIVDTDRTGTKILAEMNRLRLPGEVTFMPLNRLDARDTPY
PNISDAIPMISKLNYDQKFSRAIKHVFGKTLICRNIETATQIARTQNLDCITLDGDQVSR
RGALTGGFYDTRRSRLDLQKSKLELQQKLDTQEREYSTHKSKLEVLESKINNLVSEMQKT
ETKNSKNRDTFEKMRADLRLMTEELQSIERSRSPKEKSVASLQTSLEAMQGSAASLNEEL
GSDLLSQLSVEDQREVDYLNDQIKQLTQQNKEALTERIRLEGEKNKLENLLHNNLMKKRD
RIIHELQEVSEEDRRERLETLNSDLSTADDRIVDLKGQSKELDDQLDKMNKEQKNLQNNL
EYWKGQEKDSHEKISDDAKELEKMTNKQSLLLKKKDECMRKIRELGSLPSDAFEKYQNLS
LKQLFKKLEQCNHELKKYSHVNKKALDQFVNFSDQKEKLIKRKDELDRGHESILDLMNAL
DHRKYEAIQLTFKQVSKYFSEIFKKLAPQGHAVLVMKKGDNEQNGDDDDASPQQDVPLVE
QFTGVGIKVSFTGNRAEMKDMLQLSGGQKSLVALTLIFAIQKCDPAPFYLFDEIDQALDA
QHRKAVADMIHELAGDAQFITTTFRPELLQHADKFYGVKFRNKVSHIECVSREEAEDFVE
DDSTHG
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagcaggttattatccaaggtttcagaagctacagggaccagactgtggtg
gagccatttagccctaagcataatgtcattgttggaagaaatggatccggaaaaagtaac
ttcttttatgctatccagtttgtgctgtcagacgagttcagtcacttgagacctgaacag
agacaggcattgctgcatgagggcacagggcctcgcgtcatttctgcctttgtggaaata
atatttgacaatagtgacaacagaatacctattgaaaaagatgaggtggttctacgacgt
gtcattggatctaagaaagatcagtattttcttgacaagaaaatggtcacgaaaggtgat
gttatgaatctcctagaaagtgctggcttctcccggagtaacccctactatattgtaaaa
cagggaaagattaaccaaatggccaccgctccagattcacagcgattgaagctattgcgt
gaagtggcaggtacaaaagtttacgatgagcggaaagaagaaagtaaagtcattctccga
gaatcagagggaaaaagggagaaaattaacgatctgctgaaatatattgaggaaagatta
gcaaccctggaggaggaaaaagaagaattgaaagaataccaaaaatgggataaaatgaga
agatcactagaatacacgatacacgaccatgagttgagagatacgaggaaaaaactagac
gatcttcaagaaaaacgagaaaccagtggagtacagacacaaaaattacgggattcacag
caaaatgccaatgataaagtcaaggctatcaataaagaccttcgagagctaaagacaaga
atgcagactattttagacgagaaagaacaaattgcatcggaaaaccaagatctgacaaag
aggaaagcgaagctagaactcaatattaaagacatcctggatgatttagaaggcgacaaa
aaagcaaggaaaaaaacagaagaggaacaaaagaaagtgaatgagagaatagcaaaaaca
caggcttcccttgaagccattacaccacagtacgaagcccagcagagtcgagaagaaaac
tgtacacaacagttatctttggctgaacagagaagaaaagaactttatgcaaaacagggt
cgggggaatcagttcacatccagagatgaacgtgataattggattaaaaaagagctaaag
tcactgaatcgggccattaaagataaagaggaacagattaaaagactgcgggaagatttg
acaaatgacacaaaaagagcggaacatttaaaagtcaatatacaggatatcagtagtaag
acggaccagaacaaagatattattgaccagaaccaacggagttcctcggacatgaagaag
gagaaagaaaccattcacaatgagagaaatgccatgtggagacaagaaaacttaatgcaa
caagagttagttggtattcgcgaggagctcagtaaaaaagaacaagctctacgatcaatg
actggaaaggcaatattgaatggaatagatagtgttcaaaaagtgattcagtctttccgt
gaccagaggaaattcccagaggtgtgtgatggatatcttggtatcatgattgaaaactta
gactgtgacaaagcattcttcacctgtgtagaagtaacagccggcagcagattatttcat
cacattgtcgacacagacagaaccggtacaaagatcctggccgagatgaaccgactccga
ctaccaggggaggtaaccttcatgcctctcaacagactggacgctcgggacactccatat
cctaacattagtgatgccatccccatgataagtaagcttaactatgatcagaaattctct
cgtgcaataaaacatgtgttcggcaaaacactcatatgtcggaatattgagacggccacc
caaatagctcgaacacagaatctggattgcataacattagatggtgaccaggtaagtcgt
cgaggggcgctgaccggtggattctacgacacgagacgatccagattagatttacagaag
agtaaactagaattacaacagaaactggacacacaggaaagagagtactccactcacaaa
tccaaactggaagtcctggaatcaaagatcaacaaccttgttagtgaaatgcagaaaaca
gaaaccaaaaatagcaaaaacagagatacatttgagaaaatgagagcagatctacgatta
atgacagaggaattacaatccattgagagatctagatcacccaaggagaagagcgtggcc
agtctacagaccagtttagaggcgatgcagggatcggcagcttcacttaacgaggagtta
ggctccgacttactatcacagctgagtgtagaagaccagcgagaagtagactatctcaac
gatcagatcaaacaactcacccagcagaataaagaggccctcacagagcgcatacggctc
gaaggcgagaagaacaaattagaaaatttacttcacaataacctgatgaagaagcgagac
cggataatccatgagctacaggaagtgtcagaggaagatcggcgggagagactagagaca
ctgaactctgacctgtctacggccgacgacagaattgttgatctcaagggtcaatccaaa
gaacttgacgaccagttagataaaatgaataaggaacagaagaacttacaaaacaattta
gaatactggaagggccaagaaaaagatagccatgaaaaaatcagtgacgatgctaaagag
ttggaaaagatgacaaacaaacagtctttgctattgaaaaagaaagatgaatgtatgcgg
aaaattcgagaacttggatcattacccagtgacgctttcgaaaaataccagaatctaagc
ttaaaacagttatttaaaaaactagagcagtgtaaccatgagctgaaaaagtacagccat
gtcaacaagaaagctttggaccagtttgtaaacttctcagaccagaaagaaaaacttata
aaaaggaaagatgagttggatagaggccatgagtctatcctagatctgatgaatgcgtta
gaccacagaaaatacgaagctatccagctgacattcaaacaggtgtccaagtatttcagc
gagattttcaagaaactggccccacagggacatgctgtgctggtaatgaagaagggcgat
aacgagcaaaatggtgatgatgatgatgcgtctccgcagcaggacgttccactggtagag
cagttcactggtgtgggcatcaaggtgtcgttcacaggaaaccgggccgagatgaaggac
atgttacagttatcaggaggccagaaatcactggtagccctcacacttatatttgccatt
cagaagtgtgatcccgctccgttctatctgtttgatgaaattgatcaggctttagacgca
cagcatagaaaagcagtagcagatatgatccatgagctggccggcgatgcccagtttatt
actaccaccttccgaccagaactcctacaacacgccgacaaattctacggtgtcaagttc
agaaacaaggtgagtcatattgagtgtgtgagccgagaggaagccgaggactttgttgag
gacgactccacacacggttga
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