Argopecten irradians (bay scallop): 138335581
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Entry
138335581 CDS
T10542
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
airr Argopecten irradians (bay scallop)
Pathway
airr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138335581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
airr03019
]
138335581
03012 Translation factors [BR:
airr03012
]
138335581
Messenger RNA biogenesis [BR:
airr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
138335581
Translation factors [BR:
airr03012
]
Eukaryotic type
Release factors
138335581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
138335581
NCBI-ProteinID:
XP_069140843
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Position
11:40855113..40867851
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AA seq
442 aa
AA seq
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MASNGTDGESSADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVSKMLADEF
GTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVIYCGTIVTDEGKEKKVNIDFEP
FRPINTSLYLCDNKFHTEALTALLADDNKFGFIVMDGNGALFGTLSGNTREVLHKFTVDL
PKKHGRGGQSALRFARLRMEKRHNYVRKVAEVAVTLFITNDKPNIAGLVLAGSADFKTEL
SQSDMFDPRLQAKIIKIVDVSYGGENGFNQAIELAADALANVKFIQEKKLIGRYFDEISQ
DTGKYCFGVEDTLRALEMGAVDILIVWENLDITRYVLRNHQTEVENILHLKPEQEKDKTY
FIDKDTGVELELSEQMPLLEWFANNYKKFGATLEIITDKSQEGAQFVRGFGGIGGILRYQ
VDFQVFNTPTFDDYEDFDLDDY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaacggtacagatggtgaaagcagtgcggacagaaatgtggagatatggaag
ataaagaaactgataaaaagtctagaagcagcgagaggaaatggcaccagcatgatttcg
ctgatcattccaccaaaggaccagatatctcgagtttccaagatgttggctgatgaattt
ggtactgcatcaaacatcaaaagtagagtgaacaggttatctgtactaggtgcaatcaca
tcagtacagcagcgactcaaattatacaacaaagttcctccgaacggcctggtgatatac
tgtggtaccattgtgacagacgaagggaaggaaaagaaagtgaacattgacttcgagcct
ttcagacccatcaacacatccttgtatctctgtgataacaagtttcatacagaggccctg
accgccctcctggcagacgacaataagtttggtttcattgtaatggatggaaatggtgcc
ctgtttggcacactatcaggaaatacacgagaggtcctacacaaatttacagtcgattta
ccaaagaaacacggtagaggaggtcagtcagctcttcgttttgcccgtctccgaatggaa
aaacgacacaactatgtccgaaaagttgctgaggtggctgtcacgctgttcatcacaaat
gacaaaccaaacatcgctggcctagttctggctggttctgccgacttcaaaacagaactc
agtcagtcagatatgtttgatccaagattgcaagcgaaaatcatcaagattgttgatgta
tcgtatggtggagaaaatggatttaatcaggccatcgaacttgcagccgacgctctagca
aatgttaaatttattcaggaaaagaaactcattgggagatactttgatgagatctcacaa
gacacagggaaatattgtttcggtgtagaagatacgctgagagctttagaaatgggtgca
gtagatattctgattgtgtgggaaaatctcgacattacacgatatgtattgaggaatcac
cagactgaagttgaaaatattttacatctgaagcccgaacaagaaaaagataaaacatac
ttcattgacaaagatactggtgttgaacttgagttgtccgaacagatgccactactggaa
tggtttgccaacaactataagaagtttggtgccactttagaaattatcacagataaatca
caagagggtgcacagtttgtgcgaggattcggcggtataggaggtattttacgatatcag
gttgacttccaagtcttcaacacgccgacatttgatgattatgaggactttgatcttgat
gactattaa
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