Argopecten irradians (bay scallop): 138335988
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Entry
138335988 CDS
T10542
Name
(RefSeq) F-box DNA helicase 1-like
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
airr04121
]
138335988
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138335988
Ubiquitin system [BR:
airr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
138335988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
F-box-like
AAA_19
Viral_helicase1
F-box
AAA_30
AAA_22
ResIII
Motif
Other DBs
NCBI-GeneID:
138335988
NCBI-ProteinID:
XP_069141327
LinkDB
All DBs
Position
12:17227809..17250915
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AA seq
1231 aa
AA seq
DB search
MDPENLSNSISKTSVDEDTVISDEADTPMKKRRIHMDVQDCFAHAQTEDGLQPLSNPLES
SNKQKPKTLAPRTPRVKQSRVHNTSTRASSFGGQLKAQHKEIAGGFESATRLCASSILPE
FVDMQKESISTLLNDASGVCLPKEGCENKISTSSTATNCEVSVQNISTSCSVMNSQDANS
RSISALMSKEISKSNSSPKNSPMNTPSKSRKQMLPSNQQKLTSFFTSSQKSETGNGKSGE
DDKYVYGTTVSSYTPVKSVNGSSVIFVSDNESPDFRSSQKPSQENSSGYSSTKSSPTKCS
LKDLKENTAVKKLFEGQRNLVANPNLKPKKASSVSNRFNSNKKSIYSKKEPKADQLMRME
ADCISSSDDECMSQALDSVDKAVTNTYGLLGNGSFNKKKEEKLDYFSILPTEVMEHIFCH
LPMLDLCLNSNRVCKRWNEIISSEKFMPWKKRYHKLKKNVEGTSDEMISILCTNNMRSPS
VFLTEIISYMKDIKPVTSSNMTQCLETLPKYQWARELLEERAPHCIVNTVSNPWSMITCL
VIIAESVQEIQKVLACLTSPSSDCTTQEVLECLYRLATFLHVFKKKWSKGPFSGMHYRLF
YALYLYENASAAILGDLKEALSGKSGQQCMVKYGCADTSLRLTHEQMRVVNHDCHPGEIA
KIVAFAGTGKTTTLLRYTQLRPQTKFLLVVFNKSVCDHAKTKFPRNVDCRTGHSLAFGKE
GFRYKNAGKFRGNGPTVYSITQTIPNKKGDNLFIRAKFVLDTLNTFLSSADPVPTEHHVP
DFRTDDAGNRVPIDPQKRKMYVDDTCYLWNRMKDLDDKNVPISHDGYLKLYQLSRPRLHW
NYDCILIDEAQDLTPAISDILLSQNTSKILVGDPHQQIYSFRGAVNAMQIVQASTIFYLT
QSFRFGPEIAEIAACCLELLKNEKKKTLVGNGQTCQVLGEKVGQLAVLTRCNFTLFNEAV
KRCCHENTEDKVAFVGGTDGFGFGMIMDIYCLLLSPEQRKEERREIEHKLIKCFSDLPAL
EKYATKVQDNDLLGKIKIVRQHHHNLPGYIDKILKKTVRDTRVADVVLSTAHKSKGLEFS
TVHLTDDFVTYIQMQELEQTFHGTPLRLPSEDESNLLYVAVTRAKNALIMSPTLAKLIQR
AGCAFEYPVLSSVLKEKGVAFACMKTEAEFKPYALTLQKKDIKLSNGTTVTGGVYSPGTI
KVENPMWGGLLGTTAEDCKKEEEYEEARRNR
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgagaatttgagcaatagcattagcaagacgtcagtcgatgaagatacggtt
atttcagatgaagccgatacaccaatgaagaagaggcgcattcacatggatgtgcaggat
tgctttgcacacgcccaaacagaagatggtttgcagcctttatcaaatcctttggaatct
tccaataaacaaaaacctaaaactcttgctcctagaactccccgagttaaacaatccaga
gttcacaacactagcactagagcatcatcttttggaggccaacttaaagcacagcacaag
gaaattgcaggtggttttgaaagtgctactcgtttgtgtgcaagtagtattctaccagaa
tttgtagacatgcagaaagaaagcatttcaacattgctaaatgatgcaagtggtgtatgt
ttaccaaaggaaggatgtgaaaataaaatcagcacttctagcacagctacaaactgtgag
gtttccgtacaaaacatcagcacatcttgttctgtaatgaatagtcaggatgcaaacagt
agatcaattagtgcattgatgagtaaagaaatatctaaatcaaattcttctccaaagaat
tcccctatgaacactccttcaaagagtagaaaacagatgcttccatcaaatcaacaaaag
ttgactagcttctttacaagttctcagaaatcagaaacaggaaatggaaaaagtggtgaa
gacgataaatatgtgtatggtactacagtgtctagttacacacctgtaaaaagcgtaaac
ggttcgtctgttatttttgtcagtgacaatgaaagtccggactttcgctcctctcagaaa
ccatcacaggaaaacagttctgggtattcctctaccaagagttcacctactaaatgttcg
ctgaaagatctcaaagaaaacacagcagttaagaagctttttgaaggacagcgaaacctt
gttgctaatcctaacttgaaacccaaaaaggcttcatccgtttctaataggtttaattct
aacaaaaagagcatatattcaaaaaaggaaccaaaagctgaccagttgatgaggatggaa
gctgactgtatttcctcctcggatgacgagtgtatgtcgcaagcccttgattctgttgac
aaggcagtcacaaacacgtatggacttcttggaaatggaagctttaataagaagaaggag
gagaagttggactatttcagtatcctgccaactgaagtgatggagcacatcttctgtcac
ctaccgatgttagatctgtgtctcaacagcaacagggtgtgtaaacggtggaacgaaatc
atctcgtccgaaaagtttatgccatggaagaaacgctaccacaagctgaagaaaaatgtt
gagggtacctctgatgaaatgattagtattctgtgtacaaacaacatgaggtctccttca
gtgttcctgactgaaatcatcagttacatgaaggacatcaagcctgtgacctccagtaac
atgacccagtgcctggagacactacctaaataccagtgggctagagaactgctggaggag
agggcaccccactgtatagtcaacacggtcagtaacccttggagtatgatcacatgtttg
gtgattatagcggagtctgtacaggagatacagaaagtactagcctgtcttacctctccc
tcatctgactgtactacacaggaggttctcgagtgtctctaccgcctcgcaacatttcta
catgtcttcaagaaaaagtggtctaaaggtccatttagtggaatgcattaccgtctgttt
tatgccctgtacttgtatgaaaatgcatctgctgctattttgggggaccttaaggaggca
ctcagtggaaaatctggtcaacagtgtatggtcaaatatggctgtgctgataccagcctg
aggctaacacatgaacagatgcgagtggtgaaccacgactgtcatccaggagagatagcc
aagattgttgcttttgcaggtacaggaaaaaccacaaccctactgagatacacacaactg
aggccacagaccaagttccttctggtggtgttcaacaagtcagtgtgtgatcatgcaaag
accaagttccctcggaatgtggactgcaggactggacattctttggcctttggtaaagag
ggatttaggtacaagaatgctggaaagttcagggggaatggcccgactgtgtatagcatc
acacaaaccataccaaacaaaaagggagataacttgtttatcagagctaagttcgttctc
gacactttgaataccttcctttcttcggctgaccctgttccaacagaacatcatgtacca
gattttaggacagatgacgcaggcaacagggtaccaatagatccccaaaaaaggaagatg
tatgtggacgacacctgttacctgtggaatcgtatgaaggacctagatgacaagaatgtt
ccgatatcacacgatgggtacctgaagctgtaccagctaagccggcctcgtcttcactgg
aactacgactgtatcctgatagacgaagctcaggacctcactccagctatatcggacatc
ttactgagtcagaacacatctaagatactggtcggtgaccctcaccagcagatctactcc
ttcagaggagctgtcaatgctatgcagattgtacaagcatctacaatcttctacctgaca
cagtcattccggtttggtccagagattgcagaaattgcagcttgctgtctggaattattg
aaaaatgagaaaaagaaaacgctggttggaaatggccaaacatgtcaagtgttaggagaa
aaagtcggtcagttggccgtgctgaccagatgtaattttacactgttcaatgaagctgtg
aagagatgttgtcatgagaacactgaagataaggtggcgtttgtcgggggcacagatgga
tttgggttcggaatgatcatggatatctactgtttgttgttaagtcctgaacaaaggaag
gaagagagaagagaaatagaacacaagttgatcaagtgttttagtgacctgcctgcactg
gagaaatacgccacaaaggtccaggataacgaccttctggggaagatcaagatcgtccgc
caacatcaccacaatcttccaggctacattgataaaatcctcaaaaagaccgttcgtgac
actagagtagcggatgtagtcctgagtacagcccataagtccaagggactggagttcagt
acggtacacctaacagacgactttgtcacctacatacagatgcaggagctggagcagacg
ttccatggtacacccctacgattgccgagtgaagatgagagtaaccttctgtacgtggct
gtaactcgggctaaaaatgccctcattatgtcacccaccctagctaagctgatccagaga
gctgggtgtgcttttgaatacccggtgctgagctcggtgttgaaagagaaaggtgtggca
ttcgcatgcatgaaaacagaagcagagtttaaaccgtatgccttgaccctacagaaaaaa
gacatcaaattgagtaacggtacaacagttactggcggtgtgtacagtccagggactatc
aaggtggaaaacccaatgtggggaggactcctcggtactactgctgaggattgcaaaaag
gaggaggaatatgaggaggcgaggagaaacagatga
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