Argopecten irradians (bay scallop): 138336097
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Entry
138336097 CDS
T10542
Name
(RefSeq) uncharacterized protein
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
airr Argopecten irradians (bay scallop)
Brite
KEGG Orthology (KO) [BR:
airr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
airr03041
]
138336097
Enzymes [BR:
airr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138336097
Spliceosome [BR:
airr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
138336097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
AAA_30
Cystatin
Motif
Other DBs
NCBI-GeneID:
138336097
NCBI-ProteinID:
XP_069141496
LinkDB
All DBs
Position
12:complement(8932683..8946299)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSGNVAHNISEKRRTNDVLISDNIDFEGLLLSRTVLQGLKSSGFERPSPIQLKAIPLGRC
GLDLIVQAKSGTGKTCVFSVIALESLQTASYALQVLVLAPTREIAIQIWDVIRGIGRNIS
HLSCQTFIGGMPLQEDRQKLKKCHIAVGTPGRIKQLIEIGMMTTDSIRMFVLDEADKLLE
EGFQEQINWIYSSLPENKQMLALSATYPEYLAQHLTAYMRNPTFLRLNISDPALLGINQY
YRSVPFHPLPHKQFENKTKIVTEILSSVNFQQCLIFSNLQTRAQNMADTLTSLGWPTACI
AGRLEQKDRNEAMSKLKTYKCRVLISTDLTSRGIDADKVDLVINLDIPKDHETYLHRIGR
AGRFGTFGAAVTIVSQGQEELDLQSVEGKCNTHISLLPDPIPKDLPKSECRITIDDVVSS
QQIKTSPKHQKGLLQQKKGNRRNKHRKRKDSQDLSSKQGEDQIDLADDISINEIMSEEQH
ENSGSNGLLIESGDKIRVAMETVDGTEFMTELTDQIGVVTEIGDRNGVSSDVIEKGDITG
LTTETGDVTRLTTQTGDVTVDGTSLTCDLIKIKDKTMLTGNVTESGDHTEPHQCEVTDIQ
TVENVTEVMNSDMASNGDVKPIDIVNSEKGSDERETQTLNSKVCIGENSSLPSNGSDTID
SSLHPRIPSFKSSIGYKPVSNPHTYSSAKLELEHYKNNHNKMVDVKDIQFKVKVTPNSRC
SKVKEDLLQKVSLVLKDPNICTLTVAERVTYPDVADDTRQQGLTLKPLSVLVTDNEKEGQ
IVSLGTDTSVKQAPVKETCLQSSQQSRNDNGTVQKSTLQENGSVHKLTLQDSGRVHKHLA
NDNGAIQKSTHQENGTSHKLTLRESGTVNKKCTRDSILTFSDRDTVENHNPSLRPVSKPR
SQDEHSQIPLVQHTDKLKVKPVEKGSKADRAKSTNTSGIRSVSVKSSDIPAEDHEPSNAL
TAAIANVMKKILMHDQCNKEQLEEKVFKFLKRSIQTDRKFGNNNGEKNDGSDLSETDSSS
DSESSGEESDDERTTQVEEDEEVDEDEEDYKEFLEDKGYRNQTEWDECIEHCDDDDDDEE
YTDYGAFGGNPSVSENPKHYTQWNGWGYPYPIVPCYYPYPVYWCYPMYYPSYPTTGYQPP
GYHLPLYQPSATQTEQYLQTIRNNQAQYIQQMLHKT
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaatgttgcacataatatcagcgagaaaagaagaacgaatgacgtcctcata
agtgacaacattgactttgaaggcctgcttttatctcgcacagttctacaaggattgaag
agctctgggttcgaaaggccttcacccatacaattgaaggctattccacttggaagatgt
ggtttagatttgattgtccaagcaaagtcaggaacaggaaagacttgtgtgttttctgtc
attgccctggaaagtttacaaacagccagctatgcattacaggtgttagtgctggctcca
acaagggagatcgccatacagatttgggatgtgattcgagggattggaaggaacatttct
cacctctcttgtcagacttttataggaggcatgccactgcaggaagaccgccagaaactt
aaaaagtgccacatcgctgttggaactccaggacggatcaaacaacttatagaaattgga
atgatgacgacagacagtatccgaatgtttgttttggatgaggcggacaaattactggag
gaaggatttcaggaacaaattaattggatctactcctccctgccagagaacaaacagatg
cttgccttgtctgctacatatccagaatatttagctcaacacttgactgcctatatgagg
aatcctacctttcttcgtctcaacatttctgatcctgcccttcttggaattaaccagtat
taccgatctgtgcctttccaccccttgcctcacaaacagtttgagaataagaccaagatt
gtgacggagatcttgtcctcagttaatttccaacagtgtttgatattctcaaacctacag
acaagagctcagaatatggcggacaccctgaccagtctgggatggccgactgcctgtatc
gctggacgtctggagcaaaaggaccgcaacgaggccatgagtaaactaaagacgtacaag
tgtagagttcttatatctacagacttgacgtctcgaggaattgatgcggacaaggtggac
ttagtgatcaaccttgacattcctaaagaccatgaaacttatctccacaggattggccgc
gctggcagatttggaacatttggggctgctgttactatcgtcagccaaggacaagaggaa
cttgatcttcagtcagtggagggcaaatgtaacactcatatctcgcttctaccagatcca
ataccaaaagacctccctaaatcagagtgcaggattaccatagatgatgtagtctcttct
caacagatcaaaacttcaccaaaacaccagaaagggctccttcaacagaaaaagggcaac
agacgaaacaaacataggaagagaaaagattcacaagatctaagtagcaaacagggagag
gatcaaatagatttagcagatgatatatcaatcaatgagatcatgtcagaggaacagcat
gaaaattctggttcaaatggacttctcatagaatcaggagataaaattagggttgctatg
gagacagtcgatggaacagagtttatgacagaattaacagatcaaattggggttgttact
gaaataggtgatagaaatggagtcagtagtgatgtcattgaaaaaggggatataactggg
cttaccacagaaacaggggacgtaactagacttaccacgcaaacaggggatgtaactgtg
gatggaactagccttacttgtgatctcattaaaattaaagataaaaccatgctaactggt
aatgttactgaatcaggagatcatactgagcctcatcagtgtgaagtaacagacatccaa
acagtggaaaatgtaacagaagtaatgaacagtgatatggcatctaatggagatgttaaa
cccatagatattgttaatagtgagaaaggttctgatgaacgtgaaacacaaactctgaat
tccaaagtttgtattggtgaaaactcttctctcccatcaaatggaagtgatactattgat
tctagtcttcatcctcggattccgtctttcaaatcttctataggttacaaacctgtctca
aatcctcatacctacagcagtgccaagctagaactggagcattacaagaacaaccataac
aaaatggtggatgtcaaggacatacaatttaaggtcaaggtcactcctaactccaggtgc
tctaaagtcaaagaagatttacttcaaaaagtatctctagttctaaaggaccctaacatt
tgcactttaacagtggctgaaagagttacataccctgatgtagcagacgacacgagacag
cagggattgaccttgaaaccattatcagtattagttaccgataatgagaaagaaggccaa
attgtttctcttggaacggacacaagtgtgaaacaagctccagtgaaggaaacttgtcta
cagtcatcacaacagtcaagaaatgacaatggtacagtccagaaatccacccttcaggaa
aatggttcagtccacaaactcactcttcaggacagtggcagagtccataaacaccttgcc
aatgacaatggtgcaatccagaaatccacccatcaggaaaatggtacatcccacaagctc
accctcagggaaagtggtacagttaataaaaagtgcactagggatagtatcttaaccttt
tctgacagggatacagtagaaaatcataatccttctcttagacctgtgtcaaaacctcgc
tcacaggatgaacattcacaaattcctcttgttcagcatacagacaaacttaaggtaaaa
cctgtggaaaaaggatcaaaagctgatagagcgaaatccacaaacacttccggtatcagg
agtgtgtctgttaaatcctctgacattccagcagaagaccatgaaccatctaatgcatta
acagcagccattgcaaacgttatgaaaaagattttgatgcatgatcaatgtaataaggaa
caattggaagaaaaagtatttaaatttctgaaaagatctatacagacagacaggaaattt
ggaaataacaacggagagaaaaatgatggatctgacctgtcagagaccgactcatcgtca
gacagcgaatcatctggcgaggaatctgatgatgagaggacaactcaggtggaggaggat
gaagaggtagatgaggacgaggaggattacaaggaattcctagaggacaaaggctataga
aaccagacagagtgggatgaatgtatagaacattgtgatgatgatgatgatgatgaagaa
tacacagattatggtgcatttggtggaaatccttctgtgtcagaaaatccaaaacattac
acacagtggaatggatggggatatccctaccccattgtaccttgttactatccctacccg
gtctattggtgctaccctatgtattaccccagttacccaaccacagggtaccagccccca
gggtaccacctcccactgtatcagccctcggccacacagacagagcagtatctacagact
atcaggaacaaccaggcacagtacattcagcaaatgctgcacaaaacataa
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