KEGG   Argopecten irradians (bay scallop): 138336290
Entry
138336290         CDS       T10542                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
airr  Argopecten irradians (bay scallop)
Pathway
airr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:airr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    138336290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:airr03019]
    138336290
   03036 Chromosome and associated proteins [BR:airr03036]
    138336290
Messenger RNA biogenesis [BR:airr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     138336290
Chromosome and associated proteins [BR:airr03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     138336290
    COMPASS/SET1 complex (yeast)
     138336290
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WDR55 EIF3I ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_RFWD3 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 138336290
NCBI-ProteinID: XP_069141823
LinkDB
Position
12:complement(22871263..22892779)
AA seq 319 aa
MREPANMKLTDSVVQNFRVAKIFRENTDRITSLDYSANGETLISSSDDDSIVIYDCQNGT
PKRTLNSKKYGVDLICYTHAANTALHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTLN
MSPINDTFLSGSLDKTIRLWDLRSQNCQGLMHLPGRPVAAFDPDGLIFAAGINSEVVKLY
DLRSFDKGPFTHFKLSQDRGCDWTGMKFSPDGKLILISTNGQVLRLIDAFQGTCLQTFMG
FQNNKGIPLEASFSPDSQFAMCGSTDGRIHTWNTDTGVRVSVLNCDHPGPVQCVQFNPKY
MMLATACTNMAFWLPYIDD
NT seq 960 nt   +upstreamnt  +downstreamnt
atgagagaacctgcaaacatgaaactcacagactcagtcgttcagaattttcgtgttgct
aaaatattcagagaaaacacagatagaatcacaagtttagactattcagctaatggcgaa
acacttatatcgagcagtgacgatgattccattgtaatttacgattgtcagaatggaacg
ccaaagcggacactgaacagcaagaagtatggggttgatctcatttgctacacccatgct
gctaacactgccctccatagctcgactaaagttgatgataccatacgatacttgtccctc
cacgacaacaagtatatccggtatttcccaggtcataccaaaaaggtagtgacactgaac
atgtcacccatcaatgacactttcctatctggatccctagacaaaaccatccgactatgg
gacctacgatcacagaattgtcagggtttaatgcatttgccgggccgtccagttgctgct
tttgatcctgatggccttatctttgcagcaggcatcaattcagaggtggtcaaattgtat
gatctgagatcgtttgataagggtccattcacacatttcaaactgtcacaagaccgtgga
tgtgactggactggaatgaagtttagtcccgatggcaaacttatcctcatctccactaat
ggacaagtgctcagacttatagacgctttccagggaacttgtctccagaccttcatgggt
tttcagaacaacaagggaattccactagaagcatcctttagtccagattctcaatttgct
atgtgtggatctacagacggtaggatacatacctggaatacagatactggagtgagggtg
tctgtactcaactgtgaccaccctggaccagtacagtgtgtccaattcaaccctaaatac
atgatgttagctacagcctgcacaaacatggctttctggcttccctacattgatgactga

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