Achromobacter insolitus: BUW96_01305
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Entry
BUW96_01305 CDS
T04671
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ais
Achromobacter insolitus
Pathway
ais02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ais00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BUW96_01305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ais03021
]
BUW96_01305
Transcription machinery [BR:
ais03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BUW96_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
GerE
TMPIT
Motif
Other DBs
NCBI-ProteinID:
APX73673
LinkDB
All DBs
Position
289816..292068
Genome browser
AA seq
750 aa
AA seq
DB search
MTKSTGKSSSAIDAAETKATAAKRVVSMAAEKAPAKTAVKVAKTAAKKATKAAAADKPEK
VTKARAKKAEDKLADLVGSARPAPSGRRPGRPAKNANNDSDGFDDTMDGDGEVLPDLKPP
KRGGKRGKADPKDLIARGPVTPEEYEARRNRLKQLIKLGKDRGYLTYGEINDHLPDDLVD
AEAIDGIISTFSDMGIAVYDQAPDAETLLMSENAPVASNDDDVEDEAEAALTTVDSDFGR
TTDPVRMYMREMGSVELLTREGEIEIAKRIEDGLKHMVMAISACPTTINEILAHILRVRE
GQAQIDEVVDGLVDPEDGEEYAGAGVSAEEDEGDDGPAGGMSSKQLEDLRVKALAKFDEV
GKQFEKMRHSYEKDGYKSDVYVRAQESIQNELMGIRFTAKMVEKLADTLRQQVEEVRQLE
RAVLHTCVDRAGMPRTHFIKVFPGNETNMQWVVDEVAAGHPYAETLERQIPAVQELQQKL
IDLQTRVVLPLKDLKDVNKRMATGEAKARKAKREMTEANLRLVISIAKKYTNRGLQFLDL
IQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMN
RISRQILQETGAEPDPATLAQKMDMPEDKIRKILKIAKEPISMETPIGDDDDSHLGDFIE
DTSTLAPSDAALHGSMRDVVKEVLDSLTPREAKVLRMRFGIEMSTDQTLEEVGKQFDVTR
ERIRQIEAKALRKLRHPSRADKLKSFLEGQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccaccggcaaatcctcctctgcaattgatgcggccgaaaccaaggccacg
gcggccaagcgcgtcgtaagcatggcagcggaaaaggcgcccgccaagacggcggtgaag
gtcgccaaaacggctgccaagaaggcgaccaaggctgccgcggctgacaagccagagaag
gtgacgaaggcgcgcgccaagaaggccgaagacaagctcgccgacctggttggcagcgcg
cgccccgcgcccagcggtcgccgcccgggccgtcccgccaagaacgcaaacaacgattcc
gacggcttcgacgatacgatggacggcgatggcgaagtcctgcccgatctgaagccgccg
aagcgcggcggcaagcgtggcaaggccgatcccaaggatctgatcgcccgcggccccgtc
acgcccgaagaatatgaagcgcgccgcaaccgcctgaagcagctgatcaagctgggcaag
gaccgcggctacctgacctacggcgaaatcaacgaccatctgcctgatgacctggtcgac
gcggaagccatcgacggcatcatcagcacgttcagcgacatgggcatcgcggtctacgac
caggcacccgacgccgaaacgctgctgatgagcgaaaacgcgccggtcgcgtccaacgac
gacgacgtcgaagacgaagccgaagccgcgctgaccacggtggactccgatttcggccgc
acgacggatcccgtgcgtatgtacatgcgcgaaatgggctcggtggagctgctgactcgc
gaaggcgaaatcgaaatcgccaagcgcatcgaagacggcctgaagcacatggtcatggcc
atctcggcctgcccgaccacgatcaacgagatcctggcccacatcctgcgcgtgcgtgaa
ggccaggcccagatcgacgaagtggtcgatggcctggtcgatccggaagacggcgaagag
tacgccggcgctggcgtctcggccgaggaagacgagggcgacgacggtcccgccggtggc
atgtccagcaagcagctggaagacctgcgcgtcaaggcactggcaaagttcgacgaagtc
ggcaagcaattcgaaaagatgcgccattcgtacgagaaggacggctacaagtccgacgtc
tacgtgcgcgcccaggaatccatccagaacgaactgatgggcatccgcttcacggccaag
atggtcgagaagctcgccgatacgctgcgccagcaggtcgaggaagtgcgccagctcgaa
cgcgccgtcctgcacacgtgtgtggaccgtgccggcatgccgcgcacgcacttcatcaag
gtgttcccgggcaacgaaaccaacatgcagtgggtcgtcgatgaagtggccgccggccac
ccgtacgccgaaacgctggagcgccagatccccgccgtgcaggaactgcagcagaagctc
atcgacctgcaaacgcgagtcgtcctgccgctgaaggacctgaaagacgtcaacaagcgc
atggccaccggcgaagccaaggcccgcaaggccaagcgcgaaatgaccgaggccaacctg
cgcctggtgatttcgatcgccaagaagtacacgaaccgcggcctgcagttcctggatctg
atccaggaaggcaacatcggcctgatgaaggccgtggacaagttcgagtaccgccgcggc
tacaagttctcgacctacgcgacctggtggatccgccaggccattacgcgttccatcgcc
gaccaggcccgcaccatccgtattccggttcacatgatcgaaacgatcaacaagatgaac
cgcatcagccgccagattctgcaggaaaccggcgccgagccggatcccgcgaccctggcg
cagaagatggatatgcccgaggacaagatccgcaagatcctgaagatcgccaaggagccg
atctccatggaaacgcctatcggtgacgacgacgattcgcacctgggcgatttcatcgaa
gatacgtccacgctggcgccttccgatgcggctttgcacggttccatgcgcgatgtggtc
aaggaagtgctagactctctcaccccgcgtgaagccaaggttctgcgcatgcgtttcggc
atcgaaatgagcacggaccagaccctggaagaagtgggcaagcagttcgacgtcacacgc
gagcgcattcgccaaatagaggctaaagcgctgcgcaagctgcgtcatcccagccgggcc
gacaagctcaagagcttcctggaagggcagtaa
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