Achromobacter insolitus: BUW96_28440
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Entry
BUW96_28440 CDS
T04671
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ais
Achromobacter insolitus
Brite
KEGG Orthology (KO) [BR:
ais00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ais03016
]
BUW96_28440
Enzymes [BR:
ais01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BUW96_28440
Transfer RNA biogenesis [BR:
ais03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BUW96_28440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
APX79062
LinkDB
All DBs
Position
complement(6158959..6159489)
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AA seq
176 aa
AA seq
DB search
MSTVRLFFALWPAPPLAAKLATWAEQARPSCGGRAMRTETLHLTLAFLGPVDAALADELA
AATPERRLAPEDITLDRYGVFGRQRILWAGPGDTPPGLQAAHDELWQWLDGFGLAAPPQP
FRPHVTLLRNIEHATPPTDTPAPLSWRYDRMVLVASESLSGGSRYRIVAQSRPQNS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtacgcctgttcttcgccctgtggccggcgccgccgctggcggccaagctc
gccacttgggcggagcaggcgcggccgagctgcggcggacgcgccatgcgcacggagacc
ttgcacctgaccttggctttcctggggcccgtcgacgcggcgcttgccgatgaacttgcc
gccgccacgcccgagcgccgtctcgcgccggaggacatcacgttggaccgctatggcgtc
ttcgggcgccagcgcatcctgtgggccggccccggcgacacgccaccgggcttgcaggcc
gcccatgacgagctctggcaatggctggacgggttcggcctggcagcgccgccccagccc
ttccgcccgcacgtcaccctgctgcgcaatatcgagcacgcgaccccgcccacggatacg
cccgcgcccttgtcctggcgctacgaccgcatggtgttggtggcctccgaatcgctgtct
ggcggcagccgctatcgcatcgtggcgcaatcccggccgcagaactcctga
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