Entry |
|
Name |
(GenBank) UvrABC system protein A
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
ait Alistipes indistinctus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:ait00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AI2BBH_00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:ait03400]
AI2BBH_00630
DNA repair and recombination proteins [BR:ait03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AI2BBH_00630
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AI2BBH_00630
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(80906..83761)
|
AA seq |
951 aa
MKPEKNDIHSFPTENRIEVYGAREHNLKDVNVVIPRDTLTVITGLSGSGKSSLAFDTIYA
EGQRRYLETLSTYARQFVGTMERPDVDKITGLSPVISIEQKTTNKNPRSTVGTVTEINDF
LRLLFARASDAYSPVTGELMVHHTDAQIVDLILRDFAGRKIALLAPLIRGRKGHYRELFE
SFIKKGYLYARVDGEIREVHAGMKLDRYKIHHIELIVDRLVVKEDVRERLLKSLQETMRQ
GKGTMMVYDYDSNNVRFYSRHLMCPTSGIAFNEPAPHSFSFNSPQGACPHCNGLGEEAVF
DLERIIPDNDKSIREGAIEPLGKYRNNLLFALIEALGRKYDFTIDDPVGSLGEEALNAVL
YGDAEPLRIDTHDLGGAGNYMIAWEGVADYIEKQQEDSSSSKGNKWKEQFVVRRVCSVCG
GSRLKREALQFKIDGKNIAELSVLSIEDFAQWMEGLEERLSSRQRQIARDLLKEIRERLR
FLLDVGLGYLSLSRSSRSLSGGESQRIRLATQIGSKLVNVLYILDEPSIGLHQRDNIKLI
NSLKALRDAGNSVIVVEHDEEMIRNADWIIDVGPKAGIRGGEIVAAGTLDGVMHSGSITA
DYLSGRRKIELPAVRRTGNGKMLTVRGARGNNLKNITVDFPLGVMICVTGVSGSGKSTLV
NATLRAALNRYLYHSYDQPLEHDAIEGIANIDKLVVVDQSPIGRTPRSNPATYSNVFSDI
RKLFEATPDAQVRGFKAGRFSFNVRGGRCEACRGAGVQTIEMNFLPDVYVKCKVCNGQRY
NRETLEVKYKGKSINDVLNMTINQAVEFFEAIPSIHMKLKAIQDVGLGYLTLGQPCTTLS
GGESQRIKLSAELAKRDTGNTLYILDEPTTGLHFEDVRVLLDVLNKLVDKGNSVIVIEHN
LDVIKVADYLIDIGQEGGSGGGRLIAAGTPEEVAKVKRSYTGQFLKPLLSQ |
NT seq |
2856 nt +upstreamnt +downstreamnt
atgaaaccggaaaaaaacgatatacactcctttcctactgaaaaccggatcgaagtttac
ggagcacgcgagcacaacctcaaagatgtgaatgtcgtcatcccgcgcgataccctgacc
gttatcaccggcctgtccggttcgggcaaatcgtcgctcgccttcgacacgatctatgcc
gagggtcagcgccgttacctggagacgctttccacctatgcgcgccagttcgtcggcacg
atggaacgtcccgatgtggataagatcacgggcctcagtccggtaatttcgatcgagcaa
aagacgaccaacaagaatccccgttcgacggtcggcaccgtgaccgagatcaacgatttt
ctccgcctgcttttcgcgcgggcgtcggacgcctattcgcccgtcacgggcgaactgatg
gtacaccataccgatgcgcagatcgtcgacctgatcctgcgcgattttgccgggcgcaag
atcgcgctgctggcgccgctgatccgcgggcgtaaaggacactaccgcgaactgttcgaa
agttttattaaaaaaggctacctctatgcccgtgtggacggtgagattcgtgaggtgcat
gccgggatgaagctcgaccgttataaaatccaccatatcgagctgatcgtcgaccggctc
gtggtgaaagaggatgtccgcgaacggttgctcaaaagcctgcaggagacgatgcggcag
ggcaaagggacgatgatggtttacgattacgattcgaacaacgtccgtttttacagccgc
cacctgatgtgtccgaccagcggtatcgcattcaacgaaccggcgccgcactccttttcg
ttcaactccccgcagggggcctgcccgcattgcaacggactgggcgaggaagcggtcttc
gatctggaaaggatcatccccgacaacgataaatcgatccgcgaaggcgcgatcgaaccg
ttgggtaaataccgcaataacctccttttcgcgctgattgaggcattggggcgtaaatac
gatttcacgatcgacgatcccgtcggatcgttgggcgaggaggcgttgaacgctgtcctg
tacggcgatgccgaaccgctccggatcgatacgcatgacctgggcggtgcgggtaactac
atgattgcctgggagggtgtggccgactatatcgagaagcaacaggaggacagttccagc
agcaaaggcaacaaatggaaagagcagttcgtcgtgcggcgggtttgttcggtctgcggc
ggttcccggctcaaacgggaggcgctccagttcaagatcgacggtaagaatatcgccgaa
ctgtcggtgctcagcatcgaggatttcgcacaatggatggagggacttgaagaacgcctg
tcgtcccggcaacggcagattgcgcgcgacctgctcaaggagattcgcgaacggttgcgc
ttcctgctcgatgtaggcctgggctatctgtcgctgagccgcagttcgcgttcgctctcg
ggcggcgagagccagcgtatccggttggctacgcagatcggatcaaagttggtcaatgtg
ctctatattctcgacgagccgagtatcggcctgcatcaacgtgataatatcaaactgatc
aacagtcttaaggccttacgcgatgcggggaactcggtcattgtggttgagcacgacgag
gagatgatccgcaatgcggactggatcattgatgtcggtccgaaagccggtattcgcggc
ggagagatcgtcgctgcgggtacgctcgacggggtgatgcattccggcagtatcacggcc
gattacctgagcggtcgtcgtaagatcgaactgccggccgtgcggcgaaccggcaacggg
aagatgttgacggttcgcggtgcgcgcggcaacaacctgaagaacattacggtcgatttc
ccgctcggggtgatgatctgtgtgacgggtgtaagcggtagcggcaagtctacgctggtc
aatgcgacgttgcgcgcggcgcttaaccgttacctgtaccattcctatgatcagccgctc
gaacacgatgcgatcgaaggaatcgcaaatatcgacaagctggtggtggtcgaccagtcg
ccgatcggccgtacgccgcgcagcaatccggcgacctattccaacgtgttcagcgatatc
cggaaactgttcgaagcgacgcccgacgcacaggttcgcggtttcaaagcaggacgtttc
tcgttcaacgtcaggggcgggcggtgtgaagcgtgccggggagcgggggttcagacgatc
gaaatgaatttcctgcccgatgtctatgtaaagtgcaaggtgtgtaacgggcagcgttac
aatcgtgaaacgctcgaagtcaagtacaaaggtaagagtattaacgacgtgctgaacatg
acgatcaaccaggcggttgaatttttcgaggcgatcccgtcgatccatatgaaactcaaa
gccattcaggatgtcggcctcggttacctgacactcggacaaccctgtacgaccctttcg
ggcggggagagccaacgtatcaagttgtcggccgaacttgccaaacgcgatacgggcaat
acgctttatattttggatgagccgaccacgggactccatttcgaagatgtccgggtattg
ctcgacgtgttgaacaaattggtggacaaaggcaattcggtgatcgtaatcgaacacaac
ctcgatgtgatcaaagtggccgattacctgatcgacatcggtcaggaagggggtagcggg
ggaggccggttgatcgccgccggtacgcccgaggaggtcgctaaagtcaaaagaagttac
acgggtcagttcctcaagccgttattgagccaatag |