Alistipes indistinctus: AI2BBH_01020
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Entry
AI2BBH_01020 CDS
T06978
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ait
Alistipes indistinctus
Pathway
ait03030
DNA replication
ait03430
Mismatch repair
ait03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ait00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AI2BBH_01020
03430 Mismatch repair
AI2BBH_01020
03440 Homologous recombination
AI2BBH_01020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ait03032
]
AI2BBH_01020
03400 DNA repair and recombination proteins [BR:
ait03400
]
AI2BBH_01020
Enzymes [BR:
ait01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AI2BBH_01020
DNA replication proteins [BR:
ait03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AI2BBH_01020
DNA repair and recombination proteins [BR:
ait03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AI2BBH_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BCG53056
LinkDB
All DBs
Position
complement(131565..132341)
Genome browser
AA seq
258 aa
AA seq
DB search
MKLNLTKPIVFLDLETTGVDPAKDRIVEISLAKIMPDGTREVKTRRLNPEMHIPEAASAI
HGIYDKDVADCPTFREVSKSLWSYIEGCDFGGYNSNKFDIPVLVEEFLRAGVDIDLDKSR
FIDVQNIFHRMEQRTLVAAYKFYCGKDLTEAHSAEADTLATYEVLLSQLERYEELQNDVD
FLAEFSSRSQNVDFAGRIVYDDKGVEVFSFGKHKGRSVAEVFRTEPSYYSWMMNGDFPLH
TKKVITAIRLRELSSKEH
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaacctgacaaagccgattgttttcctcgatttggaaactaccggagtcgat
ccggccaaagaccggatcgtcgagatttcgttggccaaaataatgcccgacgggactcgg
gaggtgaaaacgcgccgcctcaatcccgaaatgcacattcccgaggcggcctcggctatt
cacggtatttacgacaaggatgtggccgattgcccgactttccgagaagtctccaaatca
ttgtggagttatatcgaggggtgcgatttcgggggctataactccaataagttcgatatc
ccggtgctggtcgaggagtttctccgcgcgggcgtggatatcgatctggacaaaagccgt
tttatcgacgtacagaatatcttccatcgcatggagcagcgcacgctcgtggctgcctac
aagttctattgcggtaaggacctcacagaggcgcattcggccgaagccgatacgctggct
acttatgaagtgttgctttcgcagttggagcgctacgaagagttgcagaacgatgtcgat
ttcctggccgagttctcttccaggtcgcagaatgtcgattttgctggccgtatcgtctat
gacgacaaaggcgtggaagtgttcagtttcggtaagcacaagggacgctcggtagccgag
gtgttccggaccgagccgagctactattcgtggatgatgaacggcgattttccgctccat
accaaaaaggtcatcactgcgatacgtttgcgcgaactgagcagcaaggagcattga
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