KEGG   Alistipes indistinctus: AI2BBH_05360
Entry
AI2BBH_05360      CDS       T06978                                 
Name
(GenBank) hypothetical protein
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ait  Alistipes indistinctus
Pathway
ait03030  DNA replication
ait03410  Base excision repair
ait03420  Nucleotide excision repair
ait03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ait00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AI2BBH_05360
   03410 Base excision repair
    AI2BBH_05360
   03420 Nucleotide excision repair
    AI2BBH_05360
   03440 Homologous recombination
    AI2BBH_05360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ait03032]
    AI2BBH_05360
   03400 DNA repair and recombination proteins [BR:ait03400]
    AI2BBH_05360
Enzymes [BR:ait01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AI2BBH_05360
DNA replication proteins [BR:ait03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AI2BBH_05360
DNA repair and recombination proteins [BR:ait03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AI2BBH_05360
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AI2BBH_05360
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: BCG53490
LinkDB
Position
complement(694715..698008)
AA seq 1097 aa
MSRCGALRSVPGGARHRPLESDRQSPGAGSPRADIGPHRATPFKANTELLMERLFLIDAY
ALIFRAYYAFIGRPMRNSEGLNTSAIFGFVKFLRDLIRREEPRLLGVAFDPKGGNFRHEI
YPQYKANREATPEDIIAAVPYIKRVLEAMRIPVIEVPGYEADDVIGTLSMKAAGAGYEVY
MVTPDKDYGQLIRPTVRIYKQRKGGDGIEVIGCEQIREHYGIDDPCRVIDILALWGDASD
NIPGVPGIGEKSAIKLVCEFGTVENLLENTDKLKGKQRENIEALREQILLAKRLATIELN
VPVEFDPAGLTMENPDLEMLADVYRELGFRSFLNELQGNPFVTAAGVAGTASGAGRGSAG
QVTAHASGITDTGGIAGGAGTTGMPGASDGRRAGVAGSRASGNAVQDASQGSLFDAFGQV
PDAGAAFPGAGDLTPSGSVSEPYAGNSPAGQRDLFAGLGEVSGVGGMVHDPNRDTANAGA
AGDRVTSAGGLFGQQYQTIDTVPHTYHTVTEPAELEALAARLAACEAFCFDTETTGFDVF
GDRLVGISVAIEPHEAWYIPCNRENTDRVVAALRPVFADEKIAKIGQNIKFDLMVLRSAG
IEVWGRLYDTMIIHYLLDPESRHGMDHLSRTFLGYDPVPIEALIGKGAKQKTMDMVPVAT
VAAYAAEDADVTLRLYRVLWPLLMQAGLTELYAKIEEPLIPVLADIEMTGVKIDTAALAS
FGQELTGELAALEERIRETTGDPSLNVNSAKQLGEALFGRMKIDPKPKMTKTKQYRTDEE
YLQMLSDRHPVIGMILEYRGLRKLLSTYVDALPQLVNPLTGRIHTSFNQAVTATGRLSST
NPNLQNIPIRDDRGREIRKAFIPSSDDRVLLSADYSQVELRLMAHLSGDRAMIEAFGHGE
DIHTATAALLFHAAKEDVTREQRRRAKTANFGIIYGISAFGLAQRLNIPRTEAKGIIDGY
FQSYPDIRQYMERVIDQARENGYVETLFGRKRMLPDIRSGNAVVRGLSERNAINAPIQGG
AADIMKLAMIAVHGELRRKGLQSKIILQVHDELVLDVLLSEQEQVREIVIRCMEGAAELK
VKLVAECGVGRNWLEAH
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgtcccggtgtggcgcactgcggtctgtgccgggcggtgcccggcacagaccgctggag
tcggaccggcagtcgcccggtgccggatcgccacgggccgacatcggtccgcatcgcgcc
actccgttcaaagccaataccgaactgctgatggagagattgttcctgatcgatgcctac
gcgctgattttccgcgcttattatgcttttatcggccgcccgatgcgcaattccgaaggg
ttgaatacttcggcgattttcgggttcgtcaaattcctgcgggatctgatccgccgcgag
gagccgcgcctgttgggcgtcgcgttcgaccccaagggcggtaatttccgccatgaaatt
tatccccagtacaaggcgaaccgggaggctactccggaggacatcattgcggcggtgccc
tacatcaagcgggtgctcgaggcgatgcgtattccggtgatcgaggttcccggctacgag
gccgacgatgtgatcggcacgctgtcgatgaaggctgccggggccgggtatgaagtttac
atggtgacgcctgataaggattacgggcagctgatccgtccgaccgtgcgcatttataag
cagcgcaagggaggagacggaatcgaggtcattggctgcgaacagatccgcgagcattac
ggtatcgacgacccgtgccgggtgatcgacatcctcgcgctgtggggcgatgcgtcggat
aatattccgggtgtgccgggcatcggcgagaagagtgcgatcaaactggtgtgcgagttc
ggtaccgtggagaacctgctcgaaaataccgataagctcaaaggaaagcagcgcgagaac
atcgaggcgctgcgcgaacagatactgttggccaaacggctggcgaccatcgagctgaat
gtgccggtcgagttcgatccggcgggacttacgatggagaaccccgatctcgagatgctg
gccgatgtctaccgggagctggggttccgttcgttcctcaatgaattgcagggcaatccg
ttcgttacggcggcgggcgttgcaggcaccgcatccggtgccggacggggaagtgcgggt
caggtgaccgcacacgcttcgggcattacggatacaggcggaattgccggtggggccggg
acaaccggaatgccgggagcttcggatggccggagagcgggcgttgcaggcagccgggcg
tcgggaaatgccgtgcaggatgcatcgcagggttcgctgttcgatgcgttcgggcaggtt
ccggatgccggggccgcgtttcccggggcaggtgatttgacaccttccggtagcgtttcg
gagccttacgcggggaactccccggcgggacagcgagatctgtttgcaggactgggagag
gtttccggggttggcggaatggtgcatgaccccaatcgggatactgcgaatgcgggcgcg
gcgggagaccgggtaacgtccgcaggcggccttttcgggcagcagtaccagacgatcgac
acggtgccgcatacttaccataccgtgaccgaacctgccgaactggaggcgctcgcggcc
cggctggccgcctgcgaagcgttctgcttcgacaccgagacgaccggattcgacgtgttc
ggagaccgcctagtcggaatttcggtcgcgatcgaaccgcacgaggcatggtatatcccg
tgcaacagggagaacacggaccgtgtggtcgcggcattgcgtccggtctttgccgacgag
aagatcgcgaaaatcggccagaacatcaaattcgacctgatggtgctgcgcagtgccggc
atcgaggtgtggggccggctctacgatacgatgatcatccattacctgctcgaccccgag
tcgcggcacggcatggaccatctctcccgcacgttcctcgggtacgatcctgtgccgatc
gaggcgctgatcggtaagggggccaagcagaaaacgatggatatggtgccggtggcgacg
gtggccgcctatgccgccgaggatgccgacgtgacgctgcggctttaccgtgtgctgtgg
ccgctgctgatgcaggcgggactgaccgaactctatgcgaagatcgaggaaccgctgatt
ccggtgctcgccgacatcgaaatgaccggcgtgaaaatcgacactgctgcgctggcctcc
ttcgggcaggagctgaccggggagctggcggccctcgaggagcgtatccgtgaaacgacg
ggcgatccgtcgctgaacgtcaattcggccaaacagctgggcgaggcgctttttggccgc
atgaagatcgacccgaaaccgaaaatgaccaaaaccaaacagtaccgtaccgacgaggag
tacctgcagatgctttccgaccgccatccggtgatcgggatgatcctggaatatcgcggg
ttgcgcaagctgctttcgacctatgtcgatgcgctgccgcagctggtcaatccgctgacg
gggcggatccatacctcgttcaaccaggcggtaacggctaccggacggctcagttcgacg
aatccgaacctgcaaaatattccgatccgcgacgaccgcgggcgcgaaatccgcaaggcg
ttcatcccgtcgtcggacgaccgcgtgctgctgtcagccgactattcgcaggtcgaactg
cggctgatggcgcacctgagcggcgaccgggcgatgatcgaagcgttcgggcacggcgag
gatatccataccgcgacggcggccctgctgttccatgcggccaaagaggatgtgacgcgc
gaacagcggcgccgggccaaaacggccaatttcggaattatctacggcatttcggcgttc
ggactggcccaacggttgaacattcctcgtacggaagccaaggggatcatcgacgggtat
ttccagtcgtaccccgatatccggcagtacatggagcgtgtgatcgaccaggcgcgcgaa
aacgggtacgtcgagacgcttttcgggcgcaagcggatgctgcccgatatccgttcgggc
aatgcggtggtgcgcggcctttcggagcgcaatgcgatcaatgctccgatccagggcggc
gcggccgatatcatgaagctggcgatgattgccgtgcacggcgagctgcgccgcaaaggg
ctgcaatcgaagattatcctgcaggtgcatgacgaattggtgctcgacgtcctgctcagc
gagcaggaacaggtgcgtgaaatcgttatccgctgcatggagggagccgccgagttgaaa
gtaaagctggtcgccgagtgcggtgtgggccgcaactggctcgaagcgcattga

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