Alistipes indistinctus: AI2BBH_05900
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Entry
AI2BBH_05900 CDS
T06978
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ait
Alistipes indistinctus
Pathway
ait03420
Nucleotide excision repair
ait03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ait00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AI2BBH_05900
03430 Mismatch repair
AI2BBH_05900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ait03400
]
AI2BBH_05900
Enzymes [BR:
ait01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AI2BBH_05900
DNA repair and recombination proteins [BR:
ait03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AI2BBH_05900
MMR (mismatch excision repair)
Other MMR factors
AI2BBH_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
ResIII
LAS2
Motif
Other DBs
NCBI-ProteinID:
BCG53544
UniProt:
A0A6S6MF19
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All DBs
Position
765000..767648
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AA seq
882 aa
AA seq
DB search
MSEYIQNLNPTQRDAAVNYQGASLIIAGAGSGKTRVLTCRIAYMLSQGVQAHTVLALTFT
NKAAKEMRERIATLVPGGMSRSLWMGTFHSVFARILRAESDKLGYPSSFTIYDSADAKNL
VKLAIKELNLSDETYKPNVVAARISKAKNNLVTPQAYEANSSLQAEDREQRIPQFLDIYK
LYARKCRENGAMDFDDLLLNTNILMRDFPEVLTKYQNQFRYILVDEYQDTNFAQYVIIRR
LGELHGNVCVVGDDAQSIYSFRGAKIENILRFQQDFPGAKLFKLEQNYRSTQTIVNAANC
VIEKNQRQIRKKSFSAADEGDPIRVIKAYTDKEESALLASDIYTTVRTRGVQYSDVAVLY
RTNAQSRALEEALRSRNIPYKIYGGMSFYQRKEIKDMLAYVRLVVNPRDDEALRRIINTP
ARGIGDVTIGRIAGAAAANGLSMWEAVSTLDPAAIGLAGAAGNKVAQFAKMIGELSEMRS
TTEAYTLGLEIATRSGLIGTYKMQQTPESISALENIEELLNSIRVYTEEQERMAADTATE
GESAPQALVQIDEWLQNVALLTDMDNENPEERNKVTLMTVHSAKGLEFEYVYVAGLEENL
FPSMMSMGTPEGLEEERRLFYVALTRAKRAAVLSFAESRFKWGEMTFGRPSRFLSEIDPQ
YLDLQFELGDSRDSDEEANSAPRYGRPGGPSRYGHPGTGPSQGYGQGGYGKRAGAPDTGG
YGQGAPGRYGRSGSSDNSGGGFPRRTDTPSPGARFRSLNARGAAQSSPATGALASRFSAI
GTERPAVRPTAPPAGYPPRPIGGATSASPHVTGATNGSDPPGASSSQGSGEMAVGTRVEH
AKFGVGEIVAIEEWTSDVKLTVDFGAAGRKVLLKKFAKLQIL
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatacatccaaaacctcaaccccacccagcgcgacgctgcggtgaattaccag
ggggcctcgctgatcatcgccggggccggctcgggcaagacgcgcgtgctcacctgccgg
atcgcctacatgctctcgcagggcgtgcaggcgcacaccgtcctcgcgctcacgtttacg
aacaaggccgccaaggagatgcgcgaacgcatcgcgacgctcgttccgggcggtatgagc
cgcagcctgtggatgggcaccttccactcggttttcgcccgcatcctgcgcgccgaatcc
gacaagctgggctacccgtcgtcgttcacgatctacgattcggccgacgcgaaaaacctc
gtgaagctcgcgatcaaggagctgaacctctcggacgagacctacaagccgaacgtcgtc
gcggcccgaatctcgaaggcgaaaaacaacctggtcacgccgcaggcctacgaggcgaac
agttcgctgcaggccgaagaccgcgagcagcggattccgcagttcctcgacatttacaaa
ctgtacgcgcgcaaatgccgcgagaacggcgcgatggacttcgacgacctgctgctgaac
acgaatatcctgatgcgcgacttcccggaggtactcacgaagtaccagaaccagttccgc
tacattctcgtggacgagtaccaggacaccaacttcgcgcagtacgtcatcatccggcgg
ctcggcgagctgcacggcaacgtctgcgtggtgggcgacgacgcgcagagcatctactcg
ttccgcggcgcgaagatcgagaatatcctgcgcttccagcaggactttcccggcgcaaag
cttttcaaactggaacagaactaccgttcgacacagacgatcgtcaacgccgcgaactgc
gtgatcgagaagaaccagcgccagatccgcaaaaaatccttctcggccgccgacgagggc
gacccgatccgtgtgatcaaggcctacaccgacaaagaggagtcggcgctgctcgcgtcg
gacatctacacgaccgtccgtacccgaggggtgcagtacagcgacgtggccgtactctac
cgcaccaacgcgcagtcgcgcgcgctggaagaggcgctgcgcagccgaaacatcccttat
aagatatacggcggcatgtcgttctaccagcgcaaggagatcaaggatatgctcgcctac
gttcggctggtcgtgaacccgcgcgacgacgaggcgctgcgccgcatcatcaacaccccc
gcgcgcggcatcggcgacgtgacgatcggccgcatcgccggcgcggcagccgcaaacggc
ctgagcatgtgggaagcggtcagcacgctcgaccccgccgcgatcggcctcgccggggcc
gccggaaacaaggtcgcgcagttcgccaaaatgatcggcgagctgtccgaaatgcgctcc
acgaccgaagcctacacgctcggcctggagatcgcgacgcgttcgggcctgatcggcacc
tacaagatgcagcagacgcccgagtcgatcagcgcgctggagaacatcgaggagctgctc
aactcgatccgcgtctataccgaagagcaggagcggatggccgccgacaccgcgaccgaa
ggggaatccgccccgcaggcgctggtccagatcgacgagtggctgcaaaacgtcgcgctg
ctcacggacatggacaacgagaaccccgaagagcgcaacaaggtgacgctgatgaccgtc
cactcggccaaggggctcgaattcgaatacgtttacgtggcgggactggaggagaacctc
ttcccgagcatgatgagcatgggcaccccggagggactcgaagaggaacgccgcctcttc
tacgtggccctcacgcgggccaagcgcgcagcggtgctgtcgttcgccgaatcgcgcttc
aagtggggcgagatgaccttcgggcggccgagccgcttcctcagcgagatcgacccgcag
tacctcgacctgcagttcgaactgggcgattcccgcgacagcgacgaggaggcgaactcc
gcgccgcggtacggtcggccgggcggcccttcgcgctacggacaccccggtaccggccct
tcgcagggttacggacagggcggctacgggaaaagagcgggtgcaccggataccggcggt
tacgggcaaggagctccgggacgttacggccgatccgggagttcggacaattccggtggg
ggattcccgcgacgcaccgacacgccctcgcccggcgcacgtttccgcagtctcaacgcc
cggggtgccgcgcagagttctccggctacgggggcgctagcatcgagattttcagccata
ggaaccgaacgcccggctgtccgacctaccgctccccccgcaggatatcccccccggcct
atcggcggtgcgacatccgcctccccacatgttacaggcgccacgaacggctccgaccct
cccggcgcatcctcctcgcagggttccggcgaaatggccgtcggcacacgggtcgagcac
gccaagttcggcgtgggagagatcgtcgcgatcgaagagtggaccagcgacgtgaagctg
acggtggatttcggcgcggccggcaggaaagtgctcctaaagaagttcgccaaactgcaa
atcctctga
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