Alistipes indistinctus: AI2BBH_06000
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Entry
AI2BBH_06000 CDS
T06978
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ait
Alistipes indistinctus
Pathway
ait03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ait00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AI2BBH_06000 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ait03019
]
AI2BBH_06000 (pnp)
03016 Transfer RNA biogenesis [BR:
ait03016
]
AI2BBH_06000 (pnp)
Enzymes [BR:
ait01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AI2BBH_06000 (pnp)
Messenger RNA biogenesis [BR:
ait03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AI2BBH_06000 (pnp)
Transfer RNA biogenesis [BR:
ait03016
]
Prokaryotic type
tRNA degradation factors
AI2BBH_06000 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_Vigilin
RNase_II_C_S1
KH_PNO1_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
BCG53554
LinkDB
All DBs
Position
complement(778708..780912)
Genome browser
AA seq
734 aa
AA seq
DB search
MLYNATQKVIQLSGGREIVIETGKLAKQADGSVVVKQGNTMLLATVVAAKEPKPDCDFMP
LSVEYKEKYAAAGRFPGGFLKREARPSDYEILVSRLIDRALRPLFPSDFHAEVFVQVNLI
SADKDIMPDALAGLAASAALAVSDVPFAGPISEVRVARINGELVINPTFTQNADADLDIM
VGATYDNILMVEGEMKEVSEAEMLEAIKFAHAEIKKHCQAQMELSKELGKDVKRTYCHET
NDEALREKVIAETYDKAYAIARERSAKHERSDKFDALEEEFCAQFSEEELAEKRPLIKRY
FHDDVLKKAMRNMILDEGIRLDGRSTTEIRPIWCEVGYLPCAHGSAIFTRGETQSLTTVT
LGTKLDEKQIDDVLFKGSEQFVLHYNFPPFSTGEARPARGLSRREIGHGNLAWRALKPMV
PVGEENPYAVRVVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLITDTKSG
KYAVLSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEVMANALEQAKQGRMHI
LGKILEAMPAPREDYKPFVPRIVQITIPQEFIGAVIGPGGKVIQEIQKTTGTTITITEKD
SKGFVDIFGENKEALDAALDRIKGIVAIPEVGEIYTGKIRSIVAFGAFVEIMPGKDGLLH
ISEIGNKRYETMEETGLKEGDTIEVKLIGLDPKNGKLKLSRKVLLPGGEKSEEKGEGRPE
RREGHHAHRREERK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttgtataatgccacacagaaggtgattcagctcagcggaggccgcgagatcgtcatc
gaaacaggaaaattagcgaagcaggccgacgggtcggtcgttgtgaaacaggggaacacg
atgctgctggccaccgtagttgccgccaaggagcccaaacccgactgcgatttcatgccg
ctgtcggtcgaatacaaagagaaatacgccgctgcgggccgtttccccggaggcttcctc
aagcgtgaggcccgcccttcggattacgaaatcctggtttcgcgactgatcgaccgcgcg
ttgcgcccgctgttcccttcggatttccacgccgaggtattcgtacaggtcaacctcatt
tcggccgacaaggacattatgcccgacgcgctggccggactggccgcttcggcggcgctg
gccgtatcggacgtgccgttcgccggcccgatctccgaggtgcgcgttgcccgcattaac
ggcgagctggtgatcaatcccaccttcacgcagaatgccgacgccgacctggacatcatg
gtaggcgccacctacgacaacatcctgatggtcgaaggcgaaatgaaagaggtttcggaa
gccgagatgcttgaagcgatcaagtttgcgcacgccgaaatcaaaaagcactgccaggcc
cagatggaattgagcaaggagctgggcaaagacgtgaagcgcacctattgccacgagacc
aacgacgaggcccttcgcgagaaggtgatcgccgaaacctacgacaaggcttacgccatt
gcccgcgaacgttcggccaagcacgagcgcagcgacaagttcgatgcgctggaggaggag
ttctgcgcacagttctccgaagaggagcttgccgagaagcgcccgctcatcaagcgttac
ttccacgacgacgtattgaagaaagcgatgcgcaacatgatcctcgacgaggggatccgc
ctcgacggccgctcgaccaccgagattcgcccgatctggtgcgaagtgggttacctgccc
tgcgcgcacggttcggccatcttcacccgtggcgagacgcagtcgctgacgaccgttacg
ctcggtacgaagctcgacgaaaagcagatcgacgacgtgttgttcaaaggttcggagcaa
ttcgtactgcactacaacttcccgccgttctccaccggcgaggcccgtcccgcacgcggc
ctctcgcgccgcgagatcggccacggcaacctcgcctggcgcgccctcaaaccgatggtt
cccgtcggagaggagaatccctacgccgtacgcgtggtgtcggatatcctcgagtcgaac
ggctcgtcgtcgatggctaccgtctgcgccggtacgctcgcgctgatggatgccggcgtc
aagatcaaaaaaccggtttcgggtatcgcgatgggtctgatcaccgacacgaaatcagga
aaatatgccgtgttgtcggacatcctcggcgatgaggaccacctcggcgatatggacttc
aaagtgactggtactaaggatggtatcactgccacccagatggatatcaaggtcgacggc
ctctcgtacgaggtgatggccaacgcattggagcaggccaaacagggccgcatgcacatt
ctcggcaagattcttgaagctatgcctgcaccgagggaggactacaaacctttcgtgccg
cgtatcgtccagatcactatcccgcaggagtttatcggcgccgtgatcggcccgggcggc
aaggtgatccaggagatccagaagaccaccggaacgaccatcacgatcaccgagaaggac
agcaagggtttcgtggacatcttcggcgagaacaaggaggcgctcgatgctgcgctcgac
cgcatcaagggtatcgtagcgattccggaggtaggcgaaatttatacggggaaaatccgt
tcgatcgtcgctttcggcgcgtttgttgagatcatgcccggtaaggacggcctgctgcac
atctccgagatcggcaacaagcgttacgagacgatggaggagaccggactcaaggaaggc
gacacgatcgaggtgaaactcatcgggttggatcccaagaacggcaaactcaaactctcc
cgcaaagtgctgcttccgggcggcgaaaagtccgaggagaagggcgaaggccgtcctgaa
cgccgcgaaggccaccacgctcaccgcagggaggaacgcaaatag
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