KEGG   Alistipes indistinctus: AI2BBH_11340
Entry
AI2BBH_11340      CDS       T06978                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
ait  Alistipes indistinctus
Pathway
ait03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ait00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AI2BBH_11340 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ait03400]
    AI2BBH_11340 (uvrB)
DNA repair and recombination proteins [BR:ait03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AI2BBH_11340 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AI2BBH_11340 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII DEAD UVR DUF87 AAA_30 SWI2_SNF2 Kinesin AAA_7 AAA_16 Microtub_bd AAA_22 MshEN PRDA1_C TetR_C_29
Other DBs
NCBI-ProteinID: BCG54088
LinkDB
Position
1463007..1465049
AA seq 680 aa
MDFKLVSDYKPTGDQPEAIEQLVSSLRGHSRHNTLLGVTGSGKTFTMANVIAQLNKPTLI
LSHNKTLAAQLYGEFKNFFPENAVEYFVSYYDYYQPEAYLPTTDTYIEKDLSINEGIEKM
RLSTTSSLLSGRNDIVVVSSVSCIYGIGNPEDFHATSITLKVGDIISRNKLLYGLVDALY
TRSETEFKQGTFRVKGDTVDIYIAYGDKCYRVVFYDNEIEAIYAVDPMTGQRLESLERIV
VYPANLFVTTRERIERAIREIQLDLGKQCEFFESVGRPVEARRLKQRVEYDLEMIKELGY
CPGIENYSRYFDGRAPGSRPFCLIDYFPKDFLLIVDESHVTIPQIRGMYGGDASRKHNLV
EYGYRLPAAVDNRPLRFEEFESLENEVIYVSATPADYELIKSEGAVVEQFIRPTGLVDPS
VEIRPTFNQIDDLVEEIDKRARVDERILVTTLTKRMAEELYKYFDHMGIRCRYIHSDVDT
LERVQILDDLRAGLFDVLIGVNLLREGLDLPEVSLVAIMDADKEGFLRSARSLTQTSGRA
ARNVGGRVIMYADTITDSMRLSIQDTNRRREKQLYYNATHAVMPKQAIKSGTKIMSGESL
GANYTLGVQGLDAAADPVAAYMTDRDIDVAIRLAREAMESAARDLDFTAAARYRDQMYAL
QERQKVMQGTASDKRPGPKK
NT seq 2043 nt   +upstreamnt  +downstreamnt
atggatttcaaattggtatcggattataaacctaccggcgaccagcccgaagcgatcgaa
cagctcgtttcgtcgttgcgcggccacagccgccacaacacgttgctgggcgtaaccggt
tcgggtaaaacgttcacgatggcgaacgtcattgcgcagctcaacaaaccgacgctgatc
ttgagccataacaagacccttgcagcacagctgtacggcgaattcaagaattttttccct
gagaatgccgtcgagtatttcgtctcctattacgactattaccaaccggaagcctatttg
ccgacgaccgatacctacatcgaaaaggacctgtcgatcaacgaggggatcgagaagatg
cgcctgagcacgacttcgtccctgctgagcgggcgtaacgacatcgttgtcgtgtcgagc
gtgtcgtgcatttacggtatcggtaatcccgaagattttcatgccacctcgatcacgctg
aaggtcggcgatatcatcagccgcaacaaactgctgtacggattggtcgatgcgctctac
acgcgcagcgaaacggagttcaaacagggaacgttccgtgtgaagggcgatacggtcgat
atctatatcgcttatggcgacaaatgttaccgggtcgttttttatgataatgagatcgag
gcgatttatgcggtcgacccgatgacgggacagcggctcgaatcgctggaacggatcgtg
gtctatccggccaacctgttcgtcactacgcgcgaacgcatcgagcgtgcgatccgcgaa
atccagctcgacctgggcaaacagtgcgaatttttcgagtcggtgggccgtcctgtcgag
gcgcgccggctcaaacagcgcgtcgagtacgatctggagatgatcaaggagctggggtac
tgtcccggcatcgaaaactattcgcgctatttcgacgggcgtgcgcccggcagccgtccg
ttttgcctgatcgattacttcccgaaggactttttgctgattgtcgacgagagccatgtg
acgatacctcaaatccgggggatgtacggcggcgatgcttcgcgcaagcacaacctggtc
gaatacggttaccggttgcctgcggcggtggataaccgcccgctgcgtttcgaggagttc
gaatcgctcgagaacgaggtgatttatgtgagcgccaccccggccgattatgagttgatc
aaatcggagggtgcagtggtcgagcagtttatacgcccgacgggtttggtcgatccgtcg
gtcgaaattcgcccgactttcaaccagatcgacgatttggtcgaggagatcgataagcgc
gcccgtgtagacgagcggattttggtgacgacgctgaccaaacggatggccgaggagctg
tataaatacttcgaccatatgggtatccgttgccgctacatccattccgatgtcgatacg
ctggagcgggtgcaaattctcgacgacctgcgtgcagggctgttcgacgtgctgatcggt
gtgaacctgctgcgcgagggactcgacctgccggaagtgtcgctggtcgcgattatggat
gcggataaagagggtttcctccggagtgcgcggtcgcttacgcagacttccggccgtgcc
gcccggaatgtcggtggtcgcgtgatcatgtatgccgatacgattaccgattcgatgcgc
ctgtcgatccaggatacgaaccgtcgtcgcgaaaaacagttgtactacaacgcgactcat
gccgtgatgcccaagcaggcgatcaaaagcggtacgaaaattatgtcgggcgaatcgtta
ggagccaattacactctcggtgtacagggtctggatgccgcagccgacccggtggccgcc
tatatgaccgaccgcgatatcgatgtggcgatccgcttggcccgcgaagcgatggaaagt
gcggcgcgcgacctcgactttaccgctgcggcccgttatcgcgaccagatgtacgcgctg
caggaacggcagaaagtgatgcagggcactgcttcagataaacggcccggcccgaaaaaa
taa

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