Alistipes indistinctus: AI2BBH_12940
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Entry
AI2BBH_12940 CDS
T06978
Symbol
hup
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
ait
Alistipes indistinctus
Brite
KEGG Orthology (KO) [BR:
ait00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ait03032
]
AI2BBH_12940 (hup)
03036 Chromosome and associated proteins [BR:
ait03036
]
AI2BBH_12940 (hup)
03400 DNA repair and recombination proteins [BR:
ait03400
]
AI2BBH_12940 (hup)
DNA replication proteins [BR:
ait03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AI2BBH_12940 (hup)
Chromosome and associated proteins [BR:
ait03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AI2BBH_12940 (hup)
DNA repair and recombination proteins [BR:
ait03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AI2BBH_12940 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Peptidase_C23
Ribosomal_L12
Motif
Other DBs
NCBI-ProteinID:
BCG54248
LinkDB
All DBs
Position
1669450..1669746
Genome browser
AA seq
98 aa
AA seq
DB search
MKKRMNKTELVKAVAAGSGLSLTDASKAVGATIEAITKSMHSGEPVVIPGFGSFTVRERA
ARSGRNPRTGETITIAARRRVHFNPGKGLDLTNNKTVK
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacgtatgaacaagacggaattggtaaaagcggtggccgccggcagcggcctg
agcctgacggatgcctccaaggcggtaggcgcgacgatcgaagcgatcacgaaaagtatg
cactccggtgagccggtcgtgatcccgggcttcgggtcgttcacggtacgtgagcgtgcc
gcacgcagcgggcgtaacccccgcacgggcgagaccattacgatcgccgcccgccggcgg
gtgcacttcaacccgggcaaaggtcttgaccttacaaacaacaaaaccgttaaatag
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