Alistipes indistinctus: AI2BBH_16620
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Entry
AI2BBH_16620 CDS
T06978
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ait
Alistipes indistinctus
Pathway
ait03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ait00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AI2BBH_16620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ait03400
]
AI2BBH_16620
Enzymes [BR:
ait01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AI2BBH_16620
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AI2BBH_16620
DNA repair and recombination proteins [BR:
ait03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AI2BBH_16620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BCG54616
LinkDB
All DBs
Position
2118059..2118892
Genome browser
AA seq
277 aa
AA seq
DB search
MIEAPEAVCLSRQLNDAVCGKYISEVVVFHSPHKFTFISPGIDYEGVLLGKRVGKARARG
GMVELAVGERALLFSDGANLTYLEPGADLPDKHQLLIGFGDESCLVVSVRMYGGVWCFSQ
GEFPGPLEPYYRSAKEKPQVLSDAFDLSYFMSLLDEPSAQKKSAKAFLATGQTIPGLGNG
VLQDILYRAGMHPKTKISGLTRQQKERLFRSVRETLREMLRLGGRDSETDLFGRPGGYRP
RLSKNTAGEPCPRCGSLICKENYLGGSIYYCPGCQPR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagctcccgaagccgtttgcctctcccggcagctcaatgatgctgtgtgcggc
aagtatatcagcgaggtggtggtgttccattcgcctcacaaatttacctttatttcaccc
ggaatcgattacgaaggcgtgcttttgggtaagcgggtcgggaaggcccgtgcgcggggc
ggcatggtggaactggcagtcggagaacgggcgctgctgttcagcgacggagcgaacctt
acctatcttgaacccggtgccgatttgccggacaagcaccagttgctcatcgggttcggg
gacgagagttgtctggtggtgtcggtgaggatgtacggcggggtgtggtgtttttcacag
ggtgagtttcccggtccgctggagccttactaccgcagtgcgaaggagaaacctcaggtg
ctgtccgacgcttttgacctctcctatttcatgtcgttgctggatgaaccgtccgcgcag
aaaaagagcgccaaggcgttcctggccaccgggcagacgattcccggtctcggtaacggg
gtgttgcaggatatactttaccgggcgggcatgcatcccaaaaccaaaatttccggattg
acccggcagcaaaaagagcgactgttccggtccgtccgggagacgctccgggagatgctg
cgtctgggaggccgcgactcggaaaccgatctgttcggccgtcccggcggataccgtccc
cgtttgtccaaaaatacggcaggggagccgtgtccccgttgcggttccctgatctgcaag
gaaaactacctggggggcagtatctattattgtcccggttgccagccgcgatga
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