Alistipes indistinctus: AI2BBH_20290
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Entry
AI2BBH_20290 CDS
T06978
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ait
Alistipes indistinctus
Pathway
ait02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ait00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AI2BBH_20290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ait03021
]
AI2BBH_20290
Transcription machinery [BR:
ait03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AI2BBH_20290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
PF0610-like_N
GerE
HTH_10
Sigma70_ECF
HTH_40
RPA
HTH_5
PhyR_sigma2
UPF0122
DAXX_hist_bd
DUF2774
HTH_11
HTH_20
Kri1_C
Motif
Other DBs
NCBI-ProteinID:
BCG54983
LinkDB
All DBs
Position
2590410..2591036
Genome browser
AA seq
208 aa
AA seq
DB search
MSKDLASALPDQEELELNSRERPLESEIVTPELLEALRDGSHEAFQTVYVHYRGPIENFL
YRLLRSREEAEEIVQNVFMVLWERRAELDPAKNIKTLLYTIARNAVINLFKRQKVFERYQ
QQRDPDDKEHLTAEDILIAQERELLIELTVKNMSSMRRKIFEMSRQQNLSHEEIAQHLEI
SKHNVANHLSQALKKIRHVLKAIIVFIH
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttagcttcggctcttcccgatcaggaggagctggaattaaacagccgg
gaacggcctcttgaaagtgagatcgtgactcccgaattgctggaagctctccgagacgga
agtcatgaggcttttcaaaccgtctatgtgcactaccggggacccatcgaaaatttcctg
tacaggctgttgcggtcccgtgaagaggcagaggagatcgtacagaatgtttttatggtt
ctctgggaaaggcgggccgaactcgatcccgctaaaaatatcaaaaccctgctttacacg
attgcccgcaatgcggtcattaatttgttcaagcgtcaaaaagtttttgagcggtatcag
cagcagcgtgatcccgacgacaaagagcatttgacggccgaggatatcctgattgctcaa
gagagggagctgctgatcgagctgactgtaaaaaacatgtcgtcgatgcgtcggaaaatt
tttgagatgagccggcagcaaaacctttcccacgaagagatcgcccagcatcttgaaata
tccaaacacaatgtagcgaaccacctgtcccaggccctgaaaaagatcagacacgtcctg
aaagcgatcatcgtattcatccattga
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