Alistipes indistinctus: AI2BBH_23880
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Entry
AI2BBH_23880 CDS
T06978
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ait
Alistipes indistinctus
Brite
KEGG Orthology (KO) [BR:
ait00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ait03016
]
AI2BBH_23880 (truA)
Enzymes [BR:
ait01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AI2BBH_23880 (truA)
Transfer RNA biogenesis [BR:
ait03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AI2BBH_23880 (truA)
Prokaryotic type
AI2BBH_23880 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BCG55342
LinkDB
All DBs
Position
complement(2996142..2996906)
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AA seq
254 aa
AA seq
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MVSVRYFLELSYSGKAYNGWQIQNNAPSVQQTLQEALSTILRVPTGVVGAGRTDTGVHAA
RYVAHFDAECLLEEPQRFCYHLNAILPWDIAVQDVRRVRDDAHARFDAVEREYKYYVSPR
KDPFRRDVAYQLIMPLDLDRMNEAAETLLGRQDFTSFSKLHSGNKTNICRVTRAQWREQD
GCYVFTVAADRFLRNMVRAIVGTLLDVGRGKLSVEGFRAVIDGRDRALAGTSAPPQGLFL
TRVDYPDDIYVKQH
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttggtttccgtgcgctattttttggaactctcctattcgggcaaagcatacaacgggtgg
cagatacagaataatgccccttcggtgcaacagacgttgcaggaggctctctccacgatt
ttacgggttccgacgggagtggtcggtgcgggacggacggatacgggggtgcatgcggct
cgttatgtggctcatttcgacgcggaatgtctgttggaagagcctcagcggttttgttac
cacctcaatgcgatcctgccctgggatattgccgttcaggacgtgcggcgcgtgcgggac
gatgcacatgcccgtttcgatgccgttgagcgggagtataagtattatgtttctccccgt
aaagacccgttccggcgtgacgtggcctaccagttgattatgccgcttgatctggaccgg
atgaacgaagcggcggagacactgctcgggcggcaggacttcaccagcttcagcaagcta
cattccggcaacaaaaccaatatttgccgggtgactcgggcacagtggcgggagcaggac
ggatgttacgtttttaccgtggcggccgaccgttttttacgcaatatggtgcgcgcgatt
gtcggtacgttgctggacgtgggacgcggtaaactgtcggtcgaaggattccgtgcggtg
atcgacgggcgcgaccgggcactggcgggaacttccgctccgccgcaggggttgttcctt
acgcgggtggactatccggatgacatatatgtgaaacagcattaa
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