Alistipes ihumii: NQ491_00405
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Entry
NQ491_00405 CDS
T08511
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aiu
Alistipes ihumii
Brite
KEGG Orthology (KO) [BR:
aiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aiu03009
]
NQ491_00405 (rlmD)
Enzymes [BR:
aiu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NQ491_00405 (rlmD)
Ribosome biogenesis [BR:
aiu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NQ491_00405 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
MTS
TRAM
Cons_hypoth95
PCMT
Methyltransf_11
FtsJ
Methyltrans_SAM
PrmA
Methyltransf_12
Methyltransf_2
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
UWN57272
LinkDB
All DBs
Position
complement(92119..93543)
Genome browser
AA seq
474 aa
AA seq
DB search
MGRKKANHPLIESLEIVAVAAEGKALGRWNDIVVFVPMAVPGDVVDVQVCCKRRRYMEGR
IVRFVRRSPLRVEPVCEHFGVCGGCKWQNMPYDEQLRFKQEQVAEQLKRIGGIELPEIGP
IRGSRQTLFYRNKLEFTFSDRRWLTPEEIAAQDEPAREPALGFHIPGLFDKVLDIRKCWL
QPDPSNAIRQEVRAFCIDRGYSFYDIREHRGLMRNLIVRTASTGEVMAIVVFGEDDRERI
DALLSHTRERFPGLASLMWVVNTKLNDTIGDLEIRLHSGRDHIFEEMESLRFKVGPKSFY
QTNSSQAYELYKIVREFAALTGQETVYDLYTGTGTIANFVAARASRVIGVEYVPEAIEDA
RTNSRLNGIDNTTFYAGDMKDVLDEAFVERNGRPDVVILDPPRAGIHEDVARTILGAAPG
RIVYVSCNPATQARDLALLDADYRVLRIQPVDMFPHTHHVENVVLLVRRNEQRI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgggaagaaaaaaagcgaatcatccgctgatcgagtcgctcgaaatcgtcgccgtagcc
gccgagggcaaggcgctcgggcgatggaacgacatcgtcgtgttcgttccgatggccgtg
ccgggcgacgtggtcgacgtacaggtgtgttgcaaacgccggagatacatggagggccgt
atcgtccgtttcgtccgccgctcgccgctgcgcgtcgagccggtctgcgagcatttcggc
gtctgcggcggatgcaagtggcagaacatgccttacgacgaacagctccgcttcaagcag
gagcaggtcgccgagcaactgaaacgcataggaggaatcgagctgcccgagatcggcccg
atcaggggctcgcggcagacgctgttctaccgcaacaaactggaattcactttcagcgac
cggcgctggctgacgcccgaggagatcgccgcgcaggacgagccggcgcgggaaccggcc
ctcggcttccatattccgggactgttcgacaaggtgctcgacatccgcaaatgctggctg
cagcccgatccgtcgaacgcgatccggcaggaagtccgcgcattctgcatcgaccggggc
tactcgttctacgatatccgcgagcatcggggactgatgcgcaacctgatcgtgcgcacc
gcgtcgacgggcgaggtgatggcgatcgtcgtgttcggggaagacgaccgcgagcgcatc
gacgcgctgctgagccacacgagagagcgctttcccggactggcatcgctgatgtgggtc
gtcaacacgaaactcaacgacacgatcggcgatctggaaatccgcctgcacagcgggcgc
gaccatattttcgaagagatggaaagcctgcgtttcaaggtcgggccgaaatcgttctac
caaaccaactcgtcccaagcttacgaactgtacaagatagtccgcgagttcgccgcgctg
accggacaggaaaccgtctacgacctgtacacgggcacgggcacgatagccaacttcgtc
gccgcccgggcgtcgcgagtgatcggcgtcgagtacgtgcccgaagcgatcgaggacgcc
cggaccaattcgcgcctcaacggcatcgacaatacgacgttctacgcgggagacatgaag
gacgtgctcgacgaggcgttcgtcgagcgcaacggtcggcccgacgtcgtgattctggac
ccgccccgggcaggtatccacgaggacgtcgcgcgcacgatcctcggcgcagcgcccgga
cggatcgtctacgtcagctgcaacccggccacgcaggcccgcgacttggcgttgctcgat
gccgactatcgcgtgctccgcattcagccggtggatatgttcccgcacacccaccacgtc
gaaaacgtcgtgctgctggtccggagaaacgaacaaaggatatga
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