Alistipes ihumii: NQ491_03260
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Entry
NQ491_03260 CDS
T08511
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aiu
Alistipes ihumii
Pathway
aiu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ491_03260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aiu03019
]
NQ491_03260
Enzymes [BR:
aiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQ491_03260
Messenger RNA biogenesis [BR:
aiu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ491_03260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ERCC3_RAD25_C
P-loop_SecA
ResIII
Utp25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
UWN57811
LinkDB
All DBs
Position
complement(808339..809538)
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AA seq
399 aa
AA seq
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MTFNELNMAEPILKAVREKGYDELTPIQQRAIPIALRGADILGIAQTGTGKTAAFALPLL
QRLVEERSLEREPSAVAGETVPLRRERRGRSHGKSGRRAIRSLVLTPTRELALQIGESFA
DYGKYTGLKHATIFGGVKQGPQTDRLRRGVDILIATPGRLLDLIAQGEVELGNLSHFVLD
EADRMLDMGFIADIRRLLPLLPVRRQTLLFSATMPRDIVALSGSVLRDPVRVEVTPASST
VDRVDQRVYFVERPEKKSLLVSVLRKQADKSVLVFSRTKHGADNIARMLKKAGIRSEAIH
GNKSQGQRQRALGDFKSGKVKVMVATDIAARGIDVSELHTVINYDLPDAAETYVHRIGRT
GRAGRSGVALTFCSQDEHAKVRDIQKLTGRKLETVSCTA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaacgaactgaacatggcggagcctattttgaaggctgtccgcgaaaaagga
tacgacgagctcacgcccattcagcagcgggctattccgatcgccctgcggggcgcggat
attctcggaatcgcccagacgggcacgggcaagacggcggcgttcgccctgcccctcttg
cagagactggtcgaggaacgatccctcgaacgggaaccgtcggccgtcgcgggagagacc
gttccgctccggcgcgagcggaggggaaggtcgcacgggaaaagcggccgccgtgctatt
cggtccctcgttctgacccccacgcgggagctcgcccttcagatcggcgagtcgttcgcc
gattacggaaagtatacgggcctgaagcacgcgacgattttcgggggagtcaagcagggg
cctcagacggacaggctccgccggggcgtcgatattctgatcgccactcccggacgtctg
ctcgacctgatcgctcagggagaggtcgaactcgggaacctgtcgcatttcgtgctggac
gaggcggaccggatgctcgacatgggctttatcgccgatatcaggcgcttgttgccgttg
cttccggtccggcgccagacgcttcttttctcggccaccatgccccgggatatcgtggct
ctgtcgggctccgtcttgcgcgatccggtacgggtcgaggtaacgcccgcttcttccacc
gtcgatagggtggaccagcgcgtctactttgtcgagagaccggaaaaaaagagcctgctg
gtatcggtgctcagaaagcaggcggacaagtcggtgctcgttttctcgcgcacgaagcac
ggtgcggacaatatcgcccgcatgctgaaaaaggccggtatccgcagcgaagcgatccac
ggaaacaagtcgcaggggcaacgccagagggccttgggcgatttcaagtcgggaaaggtg
aaggtcatggtggccaccgacattgccgcacggggcatcgacgtcagcgagctccatacc
gttatcaactacgatctgcccgatgcggccgagacctatgtccatcgtatcggccgaacc
ggccgggcgggccgctcaggcgtagcgctcacgttctgttcgcaggacgagcacgcgaag
gtcagggatatccagaagctgaccggcagaaaactcgagacggtgtcttgcaccgcctga
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