KEGG   Alistipes ihumii: NQ491_03480
Entry
NQ491_03480       CDS       T08511                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
aiu  Alistipes ihumii
Pathway
aiu03030  DNA replication
aiu03430  Mismatch repair
aiu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NQ491_03480
   03430 Mismatch repair
    NQ491_03480
   03440 Homologous recombination
    NQ491_03480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aiu03032]
    NQ491_03480
   03400 DNA repair and recombination proteins [BR:aiu03400]
    NQ491_03480
Enzymes [BR:aiu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NQ491_03480
DNA replication proteins [BR:aiu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NQ491_03480
DNA repair and recombination proteins [BR:aiu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NQ491_03480
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 Rv2179c-like DNA_pol_B_exo2
Other DBs
NCBI-ProteinID: UWN57854
LinkDB
Position
872031..872804
AA seq 257 aa
MKLNLKNPIVFLDLETTGVDPCKDRIVEISLVKVMPDGSKEVKTRRINPQMHIPEAASAV
HHIYDKDVADCPTFREIAKSLWAYIEGCDFGGYNSNKFDIPVLVEEFLRAGLDVDLHKSR
FIDVQNIFHKMEQRTLVAAYKFYCGKELDEAHSAEADTLATYEVLLAQLDRYPELKNEVD
YLAEFSSRGKCADYAGRIVFDEKGVEVFSFGKHKGRPVAEVFRTEPSYYAWMMNGDFPLY
TKKVITAIRLRELNNKE
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaaactgaacctgaaaaatccgatcgtctttctcgatctggaaaccaccggcgtcgat
ccgtgcaaagaccgcatcgtcgaaatatcgctcgtcaaagtaatgcccgacggcagcaag
gaagtcaagacgcgccggatcaacccgcagatgcacattccggaggccgcctcggccgtc
caccacatctacgacaaggatgtcgccgactgccccactttccgcgagatcgccaaatcg
ctgtgggcttacatcgaaggatgcgacttcggaggctacaactcgaacaaattcgacatt
ccggtactcgtcgaagagtttctgcgtgccggactcgacgtagacctgcacaaaagccgt
ttcatcgacgtgcagaatatcttccacaagatggagcagcgcacgctcgtggccgcttac
aaattctattgcgggaaagagctcgacgaggcccactcggccgaagccgacacgctggcc
acctacgaagtgctgctcgcgcagctggaccgttaccccgagctgaaaaacgaggtggat
tatctggccgaattctcgtcgcgcggcaagtgcgccgactacgcgggcagaatcgtcttc
gacgagaaaggggtcgaagtgttcagcttcggcaagcacaagggacgcccggtagccgag
gtattccgaaccgaaccgagttactatgcatggatgatgaacggcgacttccctctttac
acgaaaaaagtcatcaccgcgattcgcctgcgcgaactcaacaacaaagagtaa

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