Alistipes ihumii: NQ491_04600
Help
Entry
NQ491_04600 CDS
T08511
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aiu
Alistipes ihumii
Pathway
aiu03030
DNA replication
aiu03430
Mismatch repair
aiu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ491_04600 (dnaE)
03430 Mismatch repair
NQ491_04600 (dnaE)
03440 Homologous recombination
NQ491_04600 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aiu03032
]
NQ491_04600 (dnaE)
03400 DNA repair and recombination proteins [BR:
aiu03400
]
NQ491_04600 (dnaE)
Enzymes [BR:
aiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQ491_04600 (dnaE)
DNA replication proteins [BR:
aiu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NQ491_04600 (dnaE)
DNA repair and recombination proteins [BR:
aiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NQ491_04600 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
DUF655
Herpes_UL49_1
REF
Motif
Other DBs
NCBI-ProteinID:
UWN58059
LinkDB
All DBs
Position
complement(1129573..1133196)
Genome browser
AA seq
1207 aa
AA seq
DB search
MGQFTHLHVHTQYSILDGAAAIKPLLKRAKELGMTALAITDHGNMYGVKEFHDAAEKEGI
KPILGCEVYVAGGSRFDKSGKDDRGDHLILLAKNLEGYHNLSKIVSYAFTEGFYYRPRVD
KELLRLYHDGIICCSACLGGELPQAIMRGDMQEARRVVEEFVSIFGEDYYLELQLHQSGI
PRIDEQVYENQKKVNAALLQLAAEYGVKYICSNDVHFIMADDAPAHDRLICLNTGRDLDD
PNRMRYTWQEYLKSEEEMAALFPDHPEALATTAEIAGKVEEYSLEHKPLMPNFPIPDDFD
VPLDQLKETFRKKIKDEAVLAEIDRCTDSLDEVVGRHPELSDQLTIAKQFRYLEHLTYKG
AERRYGTLSDAVRKRIEYELSTIEWMGFPGYFLIVWDFIRAAREMGVSVGPGRGSAAGSV
VAYSLTITNIDPMKYDLLFERFLNPDRISLPDVDVDFDEDGRADVLHYVVEKYGSKRVAQ
IVTFGTMAPKAAIKDVARVQRLPLSESNRISKLVPEKPGTTFAKAYKEVPELVKEKESDN
PLIRDTMKYAEKLEGSVRQTGVHACGVIIGQDDLEKFAPMAIAKDAELNVVQYEGKLVES
VGLIKMDFLGLKTLSIIKDALENIESTTGSRPDIDAIPLDDPLTYDLYSRGETTGLFQFE
SPGMKKHLRNLKPNRFEDLIAMNALYRPGPMEYIPNFIARKHGLEPVTYEIPDMEEYLKD
TYGITVYQEQVMLLSQKLAGFTGGEADTLRKAMGKKKRDVLDKMKPKFIEGAKKNGHDPK
ICEKIWGDWEAFASYAFNKSHSTCYAYVSYQTAYLKAHYPAEFMAALLSRNLSDIKKISF
FMDECKRMGLSVLGPDVNHSKIRFSVDEGGNVRFGLAAIKGVGESAVQNIIDTRKEGGPF
KSVYDFVERVNLQTVNKKTLENLVLGGAFDAISDLPRSAYLARDEHDGTLLDALVRYGNR
VQSEKNNVQQSLFGGITEESSVQKPEPPQYTPWTKLETLNRERDVIGIYLSSHPLDDFSL
IIKHYCTCSLGDLADLPSMNGRDFVAAGMVTSVMHLTTKTGKPYGRFTIEDYNGSHEFVL
FSKDYENFRRFLFEGYYLLIKGKVAPRIYNPNELETRITSIMMLAEAQETLMKEVTVSVP
VDELTEELVGRLSAAAKENRGQVILRFKVYDPAAEVAVNLYSKSVKVALTGDLIRTFDDY
SLRYTLM
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggggcagttcactcatcttcatgtacatacgcaatattcgattctggacggcgcggcg
gctatcaagccgctgctcaagcgagccaaggaactcggcatgaccgcgctggcgatcacc
gaccacggcaatatgtacggggtcaaggagtttcacgacgcggccgaaaaggaggggatc
aagccgattctcggctgcgaggtctacgtggccggaggcagccgcttcgacaagagcggc
aaggacgaccggggcgaccacttgattctgctggccaagaatctggaggggtaccacaat
ctttccaaaatcgtgtcgtatgcctttaccgaggggttctactaccgtccccgggtcgac
aaggaactgctgcgcctctatcacgacgggattatctgttgctcggcctgcctgggcggc
gaactgccgcaggctatcatgaggggcgacatgcaggaggcgcgccgcgtcgtcgaggag
ttcgtctccattttcggcgaggattactacctcgagctgcagcttcatcagagcggtatt
ccgcgtatcgacgagcaggtgtacgagaatcagaagaaggtgaacgccgcgctgttgcag
cttgccgccgagtacggcgtgaaatatatctgctcgaacgacgtgcacttcatcatggcc
gacgacgcgccggcccacgaccggctgatctgcctcaatacgggccgcgatctggacgat
ccgaaccgtatgcgctatacgtggcaggagtacctcaagagcgaggaggagatggccgcg
ctgttccccgatcatccggaggctctggccacgacggccgagatcgccgggaaggtcgag
gaatactcgctcgagcataaacctctgatgccgaacttcccgattccggacgacttcgac
gtaccgctggatcagctcaaggaaacgttccgcaagaagatcaaggacgaggccgtgctc
gccgagatagaccgatgtacggattcgctcgacgaggtggtcgggcggcatcccgagctg
tcggaccagctgacgatcgccaagcagttccgctatctggagcatctgacctacaagggg
gccgagagacgctacggcacgctgtcggacgctgtccgcaagcgtatcgagtacgaactg
tcgacgatcgagtggatgggtttcccggggtacttcctgatcgtgtgggactttattcgc
gccgcccgggaaatgggcgtctcggtggggccgggccggggctcggcggccgggtcggtc
gtcgcctactcgctgacgatcaccaatatcgacccgatgaagtacgacctgctgttcgag
cgcttcctgaatcccgaccggatttcgcttccggacgtggacgtcgatttcgacgaggac
ggccgcgccgacgtgctgcactacgtggtcgagaagtacggcagcaagcgcgtcgcgcag
atcgtcacgttcggcacgatggcgccgaaggccgcgatcaaggacgtcgcccgcgtacag
aggctgcccctctcggagagcaaccgcatctcgaaactggtacccgaaaagcccgggacc
actttcgccaaggcctacaaggaagttcccgagctggtaaaggaaaaggagtcggacaat
ccgctgatccgcgacacgatgaagtacgcagagaaactcgagggctccgtgcgccagacc
ggcgtgcacgcctgcggcgtgattatcggacaggacgatctggagaagttcgctccgatg
gccatagcgaaggacgccgagttgaacgtcgtgcagtacgagggcaagctggtcgagagc
gtcgggctgatcaagatggactttctgggtctcaagacgctgtcgatcatcaaggatgcg
ctcgagaacatcgagtcgacgaccggcagccggcccgacatcgacgcgatccccctcgac
gatccgctgacttacgacctctacagccggggagagacgacggggctgttccagttcgag
tcgcccggcatgaaaaaacatctgcgcaacctgaaaccgaaccgtttcgaggacctgatc
gcgatgaacgcgctgtaccggcccggtccgatggaatatattccgaacttcatcgcccgc
aagcacggtctggagcccgtcacgtacgagatacccgacatggaggagtatctgaaggac
acgtacggcattacggtctatcaggagcaggtcatgctgctgtcgcagaagctggccggc
tttaccgggggagaggccgacacgctgcgcaaggcgatgggaaagaagaagcgcgacgtg
ctggacaagatgaagcccaagttcatcgagggcgcgaagaagaacgggcacgacccgaaa
atctgcgagaagatatggggggactgggaggcgttcgcgtcgtacgcgttcaacaagtcg
cactcgacctgctacgcttacgtttcctatcagacggcctatctgaaggcccactatccg
gccgagttcatggccgcactgctgagccgcaacctgtcggatatcaagaagatcagcttc
ttcatggacgagtgcaagcggatgggcctctcggtgctggggcccgatgtcaatcacagc
aagatccgcttctcggtcgacgaggggggcaatgtccgtttcggtttggccgctatcaag
ggcgtgggcgagtcggccgtgcagaatatcatcgacacgcgcaaggaaggagggcctttc
aagtccgtgtacgatttcgtagagcgggtcaatctgcagaccgtcaataagaaaacgttg
gaaaatttggtgctcggaggcgcgttcgacgcgatcagcgacctgccgcgcagcgcctat
ctggcgcgggacgagcacgacggtacgctgctggatgcgctggtacggtacggaaaccgc
gtgcagagcgagaagaacaacgtgcagcagagcctgttcggcggcattaccgaggagtcg
tcggtgcagaagcccgagccgccgcaatatacgccttggacgaaactcgagacgctgaac
cgcgagcgcgacgtgatcgggatctacctgtcgtcgcatccgttggatgacttttcgttg
attatcaaacattactgtacctgctcgctgggcgatctggccgatctgccgtcgatgaac
gggagagatttcgtcgcggcgggcatggtcacctcggtcatgcacctgaccacgaagacg
ggcaagccctacggacgcttcacgatcgaggattacaacggctcgcacgaattcgtgctg
ttctcgaaggattacgagaatttccgccgcttcctgttcgagggttactatctgcttatc
aaggggaaggtcgctccgcgcatatacaatcccaacgagctggagacgcgcattacgtcg
atcatgatgttggccgaagcgcaggagacgctgatgaaggaggtgaccgtgtcggttccc
gtcgacgaactgaccgaggaattggtcggcaggctgtcggccgccgcgaaggagaaccgg
ggccaggtgatcctgcgtttcaaggtgtacgacccggcagccgaagtggcagtgaatttg
tattcgaagagcgtcaaggtcgcgctgaccggcgacctgatccggactttcgacgattac
tcgcttcgatatacgttgatgtag
DBGET
integrated database retrieval system
