Alistipes ihumii: NQ491_04840
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Entry
NQ491_04840 CDS
T08511
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aiu
Alistipes ihumii
Pathway
aiu03420
Nucleotide excision repair
aiu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ491_04840
03430 Mismatch repair
NQ491_04840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aiu03400
]
NQ491_04840
Enzymes [BR:
aiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQ491_04840
DNA repair and recombination proteins [BR:
aiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ491_04840
MMR (mismatch excision repair)
Other MMR factors
NQ491_04840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_12
AAA_11
DUF3553
DUF7806
Motif
Other DBs
NCBI-ProteinID:
UWN58103
LinkDB
All DBs
Position
1190816..1193278
Genome browser
AA seq
820 aa
AA seq
DB search
MSEYIEKLNDVQREAVVNYRFPSLIVAGAGSGKTRVLTCRIAYMLEQGVPPQSVLALTFT
NKAAREMRERIGQLLSPAMTRGLWMGTFHSIFARILRDESDRLGYPRSYTIYDSSDAKNM
VKTAIRELNLSDETYKPGDIAARISLAKNNLITPSAYEANASLQAEDRERRRPQFLDIYK
LYARKCRENGAMDFDDLLLNVNILFRDFPDALEKYQNQFGYILVDEYQDTNFAQYAIIRR
LAQNHANVCVVGDDAQSIYSFRGAKIENILRFQNDFPDAKVFKLEQNYRSTQNIVNAANS
IIEKNTKQIRKKSFSSGDQGEKIKVIKAYTDKEEASLIASDLYAAVRGGGVPYSETAVLY
RTNAQSRALEEALRNRNIPYKIYGGVSFYQRKEIKDLLAYVRLVVNPKDDEAFRRIVNTP
SRGIGDVTVGRIAAAAQAAGTSLWEAASTMTPESMELKGAAAKKIKEFAGMIADLSAMRA
TAEAYDLGLEIATRSGILGTYKMQQVPEAVSALENIEELLNSIRAYTDEQRQIAASEEGE
GETGTSHVTIDEWLQNIALLTDMDNEKSEDRDRVTLMTVHGAKGLEFEHVYVAGLEENLF
PSMMSLGTPEGLEEERRLFYVALTRAKRSAVLSFAESRFKWGEMTFCRPSRFLSEIDPKY
LDLQFDLGEGGQNEDPTPQRQVRTRFAERGRNAETQRGEYGRRPGGYGQRPDAYGGETRT
YYPPKTQERPTPRPVPAPGGRFRSMGSRPAAETGGAERAAAVPFDGDYAEGMLVEHAKFG
VGTVTAVEEWSGDQKITVEFGGAGRKTLLRKFAKLTVLKK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaatacatcgaaaagctcaacgacgtgcagcgcgaggccgtcgtcaactaccgc
ttcccctcgctgatcgtggccggggccggctcgggaaagacccgggtgctcacctgccgc
atcgcctacatgctcgagcagggcgtaccgccgcagtcggtgctggcgctgaccttcacg
aacaaggccgcgcgggagatgcgcgagcggatcgggcaactgctctcccccgcgatgacg
cgcgggctgtggatggggactttccactcgatcttcgcccgcattctccgggacgagtcc
gaccggctcggatacccccgctcgtacacgatctacgactcgtccgacgcgaagaacatg
gtcaagaccgcgatccgagagctgaacctgagcgacgaaacctacaagcccggcgacatc
gcggcccgcatctcgctggccaagaacaacctgatcacgccttccgcctacgaggcgaac
gcctccctgcaggccgaagaccgcgagcggaggcggccccagtttctggacatctacaag
ctctatgctcgcaaatgccgcgaaaacggggcgatggacttcgacgacctgctgctgaac
gtcaatatcctgttccgggacttccccgacgcgctggaaaaataccagaaccagttcggc
tacattctggtcgacgagtatcaggacacgaacttcgcgcagtacgcgatcatccgccgc
ctggcccagaaccatgcgaacgtctgcgtcgtgggcgacgacgcgcagagcatctattcg
ttccgaggcgcgaagatcgagaacatcctgcgcttccagaacgacttccccgacgcgaag
gtcttcaagctcgagcagaactaccgctcgacgcagaacatcgtgaacgccgcgaacagc
atcatcgagaagaacacgaagcagatccgcaagaagtcgttctcgtcgggcgatcagggc
gagaagatcaaggtcatcaaggcctacaccgacaaggaggaagcctcgctgatcgcctcg
gacctgtacgccgccgtgcgcggcggaggcgtgccctacagcgagacggccgtgctgtat
cgcaccaacgcgcagtcgcgggcgctggaggaggcgctgcgcaaccggaacataccctac
aagatatacggcggcgtgtcgttctatcagcgcaaggagatcaaggacctgctcgcctac
gtgcggctggtcgtcaacccgaaggacgacgaggcgttccgccgcatcgtcaacacgccc
tcgcgcgggatcggcgacgtgacggtcggccggatcgctgcagccgcccaagcggccgga
acgagcctgtgggaggcggccagcacgatgacgcccgaaagcatggaactcaagggtgcg
gcggcgaagaagatcaaggagttcgccggcatgatcgccgacctgtcggccatgcgcgcg
acggccgaggcttacgatctggggctcgaaatcgccacccggtcgggcattctgggaacc
tacaagatgcagcaggtgcccgaagcggtcagcgcgctcgaaaacatcgaggagttgctc
aattcgatccgcgcctataccgacgagcagcgccagatcgccgcgagcgaggaaggcgaa
ggggagaccggcacgtcgcacgtgacgatcgacgagtggctgcagaacatcgcgctgctg
acggacatggacaacgagaagtccgaagaccgcgaccgcgtgacgctgatgacggtccac
ggcgccaaagggctcgagttcgagcacgtctacgtggccgggctggaggagaacctgttc
ccgagcatgatgagcctcggcacgcccgagggactcgaggaggagcgcaggctgttctac
gtcgcgctgacgcgagccaagcgcagcgccgtactgtcgttcgccgagtcgcgcttcaag
tggggcgagatgactttctgccgaccgagccgttttctgagcgaaatcgatccgaaatac
ctcgacctgcaattcgacctcggcgagggcggtcagaacgaggacccgacgccgcagagg
caggtccggacccgcttcgccgaacgcggacggaacgccgaaacgcagcgcggagaatac
ggacggcgccccggcggttacgggcagcggccggacgcatacggcggagagacccgcacg
tactatccgcccaagacgcaggagcgcccgacgccccggcccgtaccggcgccgggaggg
cgcttccgcagcatgggcagccgtccggccgcagagaccggcggagcggagcgtgcggca
gccgtgccgttcgacggagactatgccgaggggatgctcgtcgagcatgccaagttcggc
gtcggcacggtcacggccgtcgaagagtggtcgggcgaccagaagatcaccgtcgagttc
ggcggcgcgggacgcaagacgctgctgcgcaagttcgccaagctgacggtgctgaaaaaa
taa
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