Alistipes ihumii: NQ491_05120
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Entry
NQ491_05120 CDS
T08511
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
aiu
Alistipes ihumii
Pathway
aiu00550
Peptidoglycan biosynthesis
aiu01100
Metabolic pathways
aiu01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
aiu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NQ491_05120 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NQ491_05120 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aiu01011
]
NQ491_05120 (mrdA)
Enzymes [BR:
aiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NQ491_05120 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
aiu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NQ491_05120 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF4199
Motif
Other DBs
NCBI-ProteinID:
UWN58155
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Position
1261198..1263024
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AA seq
608 aa
AA seq
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MDSLKRVKTLQISVVAVAIVLLLRLFYIQVIDDSYKSNAANNVLRYTVQYPPRGEVYDRN
GRFLVQSKEAYDLMAIPREIRPFDTAAMSRILGVSVEQIRKELRKASNFSRRRASVIFKQ
LPKEVKLRFEEHGFPGFFTVYRTVRSYPTKMAGNLLGYVGEVNDRILERNPYYRSGDYIG
MSGIEQAYEEVLRGEKGVKIEMVDVHGIPKGSYANGIYDTLPSPGVAITCTIDGRLQAFA
EELMQGKVGSVVAIEPATGEILVMASSPTYDPDELVGRERGNNYMKLLDDPRRPLFNRAV
MSSYPPGSTFKVVQGLIGLQEGVLVPEQTYPCHGGYPYGRGMACHEHYSPLDLEGAIQNS
CNAYFCYVFRNVIENKKYGDIDEGFDLWADYVRSFGYGRKLGSDFTGELNGNVPEAAFYD
KAYRGRWNGLTVISLSIGQGELGCTPLQMANMVATVANRGHYRIPHVVKRIHDRDSIDAR
FYEDHYTKVDARHFDPIVEGMYKAVNEGGTGRIAMVPGLDICGKTGTAQNPHGADHSTFF
CFAPRNDPKIAVSVYVENGRFGATIAAPIASLLTELYLTDTITRPALVDYVKNMQIAYPY
YEKQRKGK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggacagtctcaagcgagtcaagacactacaaatcagcgttgtcgcagtagcgatcgtg
cttctgctgaggcttttctacattcaggtcatcgacgacagttacaaatcgaacgcggcg
aacaacgtgctgcgctacacggtgcaatatccgccgcgaggcgaagtgtacgaccgcaac
ggccgctttctggtgcagagcaaggaagcctacgatctgatggccatcccgcgcgagatc
agaccgttcgacacagcggcgatgagccgcatactgggcgtcagcgtcgaacagatccgc
aaggagctccgtaaagcgagcaacttctcgcgccggagagcctcggtcattttcaaacag
ctacccaaggaggtcaagctgcgcttcgaggagcacggctttccgggtttcttcaccgtc
taccgcacagtgcgctcctacccgaccaaaatggcaggcaacctgttgggctacgtgggc
gaggtcaacgaccgcatcctcgagcgcaacccgtactaccgcagcggcgactacatcggc
atgagcggtatcgagcaggcttacgaagaagtgcttcgcggagaaaagggcgtcaagatc
gaaatggtcgacgtacacggtatccccaaaggctcctatgcgaacggcatttacgacacg
ctgccctcgccgggcgtcgcgatcacctgcacgatcgacggccgattgcaggcgttcgcc
gaggagctgatgcagggcaaggtaggcagcgtcgtcgcgatcgagcccgctacgggagaa
atactggttatggccagcagccccacttacgatcccgacgaactggtcggacgcgagcgg
ggaaacaactacatgaagctgctcgacgacccgcgccggccgctgttcaaccgggccgtc
atgtcgtcctatccgcccggttcgacgttcaaggtcgtgcagggcctgatcggattgcag
gaaggcgtgctcgtccccgagcagacttatccgtgtcacggcggatacccgtacggccga
ggcatggcatgccatgagcactactctccgctcgacctggagggagcgatccaaaactcg
tgcaacgcttatttctgctacgtgttccgcaacgtcatcgaaaacaagaaatacggcgac
atagacgaagggttcgacctgtgggcggactacgtccgcagcttcggatacggccgcaag
ctcggctcggacttcacgggcgagctgaacggcaacgtgcccgaagcggctttttatgac
aaagcctaccggggaaggtggaacggactgaccgtcatctcgctgtcgatcggacagggc
gaactgggctgcacgccgcttcagatggccaacatggtggccaccgtggccaaccggggc
cattaccgtattccgcacgtcgtcaagcgcatccacgaccgggattcgatcgacgcgcgt
ttctacgaggaccattacacgaaagtcgacgcgcgccacttcgacccgatcgtcgagggc
atgtacaaggccgtcaacgaaggcggcacggggcgcatcgcgatggtgccgggcctcgac
atctgcggcaagaccggaacggcgcagaacccgcacggagcggatcacagcacctttttc
tgcttcgcgccccgcaacgacccgaaaatcgccgtctcggtctatgtcgagaacggccgc
ttcggcgcgacgatcgccgcgccgatcgccagcctgctcacggaactctatctgaccgac
acgatcacgcggccggcgctggtcgattacgtcaagaacatgcagatcgcctatccttac
tatgagaagcagcgaaagggaaaatag
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