Alistipes ihumii: NQ491_05845
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Entry
NQ491_05845 CDS
T08511
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aiu
Alistipes ihumii
Pathway
aiu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aiu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NQ491_05845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aiu03021
]
NQ491_05845
03400 DNA repair and recombination proteins [BR:
aiu03400
]
NQ491_05845
Enzymes [BR:
aiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NQ491_05845
Transcription machinery [BR:
aiu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NQ491_05845
DNA repair and recombination proteins [BR:
aiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NQ491_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UWN56196
LinkDB
All DBs
Position
complement(1448148..1449140)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPEKVIMLESTSSFGRFEFRPLEPGFGMTVGNALRRILLSSLEGYAITTVKVS
GVDHEFAAIPGVMEGMLEIILNLKQVRFIRTVENVDSEKVTVNVAGQTELTAGYISNFLT
NFKVLNPELVICRLDPDVKVQMELTINKGRGYVPADENRPADAEFGLLPIDSIHTPIKNV
KYSVENYRVEQKTDYEKLNIEVTTDGSIHPKDALKEAAKILIHHFMLFSDEKITLNMEEN
SATEEFDEDVLHMRQLLKTKLSDQDLSVRALNCLKAAEVETVGDLVRFNRNDLLKFRNFG
KKSLSELDDLLATLNLHFGMDVSIYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattagcatttcaaaagcctgaaaaggtaatcatgctcgagtccacctcctcc
ttcggacggtttgagtttcgtccgttggagccgggattcggaatgaccgtcggcaacgcg
ctgcgtcgtatcctgctgagttcgctcgaggggtatgccatcacgaccgtgaaagtgtct
ggcgtagaccatgagtttgctgctatccccggtgtaatggaaggaatgctcgagatcatt
ctgaatctcaagcaagtgcgtttcattaggaccgtcgagaacgtcgacagcgagaaggtg
acggtcaacgtggccgggcagacggagctgacggccggctatatctcgaacttccttacg
aatttcaaggtgctgaatcccgagttggtgatctgccggctggaccccgacgtaaaggtc
cagatggagctcacgatcaacaagggacgcggatacgtgcctgccgacgagaatcggccc
gccgatgcagagttcggcttgctccccatcgattcgatccatactccgatcaagaacgtc
aagtactcggtcgagaactaccgcgtggaacagaaaacggactacgaaaagctcaatatc
gaggtgactacggacggctcgatccatccgaaggatgcgctgaaggaagccgccaagata
ctgatccaccatttcatgctcttttcggacgagaagatcacgctgaacatggaggagaac
agcgcgaccgaggaattcgacgaggacgtgctccacatgcgtcagttgctgaagaccaag
ctttccgatcaggacctttcggtgcgcgcgctgaactgcctgaaggcggccgaggtggag
acggtgggcgatttggtccgtttcaaccggaacgatctgctcaagttccgcaatttcggc
aagaagtcgctttccgagctggacgatctgctcgccacgctgaacctgcatttcgggatg
gacgtttccatttacaagctggacaaagactaa
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