Amycolatopsis japonica: AJAP_00910
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Entry
AJAP_00910 CDS
T03225
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aja
Amycolatopsis japonica
Pathway
aja03030
DNA replication
aja03430
Mismatch repair
aja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AJAP_00910
03430 Mismatch repair
AJAP_00910
03440 Homologous recombination
AJAP_00910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aja03032
]
AJAP_00910
03400 DNA repair and recombination proteins [BR:
aja03400
]
AJAP_00910
Enzymes [BR:
aja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AJAP_00910
DNA replication proteins [BR:
aja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AJAP_00910
DNA repair and recombination proteins [BR:
aja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AJAP_00910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
TerB
Motif
Other DBs
NCBI-ProteinID:
AIG73119
UniProt:
A0A075UKN0
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All DBs
Position
182441..184000
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AA seq
519 aa
AA seq
DB search
MAETVENLALTPDGRFAVGTTEFTAIDFETTGLHPGHVVEVAAVRIRADGTVLREFSTLV
NPGPGVDPGPAHVHRITRRELDGAPYLGEVLGDFLDVCQGSVLVGHNLPFEARFLDGESG
RLGARIPAMPGVCTLAAARRALRLPNYRLATVAEAVGVGEFAAHTALADAYVCARLVTTL
VTTHGLRFTERPVFPELPRFAPATRLSPRRVVVPSGGTWMADFVDRVPEAAFGATGSLQD
AYVELLGNALADRHISDAEARALGAAASAAGMSDTDLHRVHTGFVKAMRELAESDGVITA
EEERDLRAVAAALRVPETLHGLRATGAASGVRRRVLVLGDGLAEDDLRAAVLDAGLQLAK
KLTASVTHLAVGSGVPPAEPRIARAGELGAKVLRVAEAREVLGLVPRPAPVSAPIPVPPP
APIPAPVAPAHRPVYAAEQRTAAFVPYPQPPVPHGPIPPVPSPPSVALWGGRVLMGFGML
LMFITVLALFGGAGLAAGVFVGVLGVGGLLGGWQIAVRA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacagtcgaaaatctggcgttgactccagacggccggttcgccgtggggacg
accgaattcaccgccatcgacttcgagaccaccggcctgcaccccggacacgtggtcgag
gtcgcggccgtgcgcatccgggcggacggcacggtcctgcgtgagttttcgacgctggtc
aatccgggccctggcgtggatcccggccccgcccacgtgcaccggatcacccgccgcgag
ctcgacggcgctccctatctcggcgaggtactgggcgacttcctcgatgtctgccagggc
agtgtcctggtcggacacaacctgcccttcgaggcgcgcttcctcgacggggagtccggc
aggttgggcgcgcggatcccggcgatgccgggcgtgtgcacgctggccgcggcccggcgc
gcgctgcggttgccgaactatcgcctggccacggtggccgaggcggtcggcgtcggcgag
ttcgcggcgcacacggcgctcgccgacgcctacgtgtgcgcccggctggtgacgacgctg
gtgaccacacacggcctcaggttcacggaacggccggtgttcccggaactgccgcgattc
gcgcccgccacgcgcctgtcgcctcgtcgtgtggtggtgccgagcggtggcacctggatg
gcggacttcgtcgaccgggtacccgaggccgcgttcggagcgaccggttcgctgcaggac
gcctacgtcgaactgctcgggaacgccttggcggaccgtcatatctcggacgccgaggcg
agggcactcggcgcggcggcctcggcggcggggatgtcggacaccgatctgcaccgcgtg
cacaccggcttcgtcaaagccatgcgcgagctcgccgaaagcgacggcgtcatcaccgcg
gaggaagagcgggatctgcgcgccgtcgcggcggccttgcgggtgcccgaaacgctgcac
gggctccgggccaccggggccgcatccggcgtgcgtcgccgcgtcctcgttctcggcgac
gggctggcggaggatgatctgcgcgccgcagtgctcgacgcgggccttcagctcgcgaag
aagctcaccgcgtcggtgacccatctggccgtgggctccggagtcccccctgccgagcca
cggatcgccagggcgggtgaactcggcgcgaaggtgctcagagtcgccgaggcgcgtgaa
gtgctgggtctcgttccgcggccggcgcccgtgtccgccccgatccccgtgccgccgccc
gccccgattccggctcccgtggctccggcgcaccggccggtctacgccgctgaacagcgg
acggcagccttcgtgccttatccgcagccacctgttccgcacgggcccataccgccggtg
ccgtccccgccgtcggtcgcgctgtggggaggcagggtcctcatggggttcgggatgctg
ctcatgttcatcacggtgctcgcgttgttcggcggcgcggggctcgccgcgggcgttttc
gtgggcgtgctgggtgtcggtggcctgctcggcggctggcagatcgccgtcagggcttga
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