Amycolatopsis japonica: AJAP_05570
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Entry
AJAP_05570 CDS
T03225
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
aja
Amycolatopsis japonica
Pathway
aja00250
Alanine, aspartate and glutamate metabolism
aja00310
Lysine degradation
aja00350
Tyrosine metabolism
aja00650
Butanoate metabolism
aja00760
Nicotinate and nicotinamide metabolism
aja01100
Metabolic pathways
aja01120
Microbial metabolism in diverse environments
Module
aja_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
AJAP_05570 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AJAP_05570 (gabD)
00310 Lysine degradation
AJAP_05570 (gabD)
00350 Tyrosine metabolism
AJAP_05570 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
AJAP_05570 (gabD)
Enzymes [BR:
aja01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
AJAP_05570 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
AJAP_05570 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
AJAP_05570 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIG74034
UniProt:
A0A075UN85
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Position
1115014..1116477
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AA seq
487 aa
AA seq
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MSSISEAGVVTSVDKELFIGGKWVPAADGKTFPVLDPSTGEALCEVADASPADGVSALDA
AVAAQADWANVAPRERGEILRRAYELLIKRADELALLMTLEMGKPLAESKGEITYAAEFF
RWFAEEAVRIDGGYAVAPNGTGRFLVTKQPVGPCLLITPWNFPMAMGTRKIGPAVAAGCT
MVIKPAAQTPLSMLALAAILAEAGLPEGVLNVLTTSDSGGVMEPLIRDGRARKLSFTGST
GVGRKLLEQCADKVLRTSMELGGNAPFLVFEDADLDAAVEGAMTAKMRNIGEACTAANRF
YVQRGIVDEFSRRLTERMEALPMGRGTEEGVVVGPLIDEAAVEKVSGLVADATERGARVL
TGGSTVDGPGNFYQATVLTDVPKDARLASEEIFGPVAPITPFDSEDEAIAAANDTEFGLV
SYVYTSDLKRALRVSERLEAGMIGLNQGLVSNPAAPFGGIKQSGLGREGGTVGIDEFLET
KYIAVAL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgatcagtgaggccggcgtggtcacgtcggtcgacaaggaactgttcatcggc
ggcaagtgggtgcccgccgccgacgggaagaccttccccgttctcgacccctcgacaggc
gaagccctgtgcgaggtggccgacgcgtcaccggcggacggtgtcagcgcactcgacgcg
gccgtggccgcgcaggccgactgggcgaacgtcgccccgcgtgaacgcggtgagatcctg
cgccgcgcctacgaactgctgatcaagcgcgccgacgaactcgcgctgctgatgaccctc
gagatgggcaagccgctcgcggagtcgaagggcgagatcacctacgcggccgagttcttc
cgctggttcgcggaggaagccgtccggatcgacggtggctacgccgtcgctcccaacggg
acaggccggttcctcgtgaccaaacagccggtcggcccgtgtctgctgatcacgccgtgg
aacttccccatggcgatgggcacccgcaagatcgggcccgcggtggcggcaggctgcacg
atggtcatcaaacccgctgctcagacccccctttcgatgttggccctcgcggccatcctc
gccgaagcgggattgccggaaggcgtgctgaacgtgctgacgacgtcggactccggcggc
gtgatggagccgttgatccgggacggtcgcgcccgcaagctgtccttcaccggctcgacc
ggcgtcggccggaagctgctggaacagtgcgcggacaaggtgctccgcacctcgatggaa
ctcggcggcaacgcccccttcctcgtcttcgaagacgccgacctcgacgcggcggtcgaa
ggtgcgatgaccgcgaagatgcgcaacatcggtgaagcctgcacggccgcgaaccgcttc
tacgtccagcggggcatcgtcgacgagttctcccggcgcctcaccgagcgcatggaggcc
ttgcccatggggcgcggcaccgaggagggtgtcgtggtcggccccctcatcgacgaagcc
gccgtcgagaaggtcagcggcctggtcgccgacgccaccgagcgaggcgcgcgcgtcctc
accggtggatccactgtggacggtccgggcaacttctatcaggccacggtgctcaccgac
gtgcccaaggacgccaggctcgcgtcggaagagatcttcgggccggtcgccccgatcacc
ccgttcgacagcgaggacgaggccatcgcggcggcgaacgacaccgaattcggtctcgtg
tcctatgtgtacacctccgatctcaagcgggcattgcgggtttcggaacggctggaggcc
ggcatgatcggcctcaaccaagggctggtttcgaatccggcggcgccgttcggcgggatc
aagcaatccggcctcggccgcgagggcggcaccgtcggcatcgacgagttcctcgagacc
aagtacatcgcggtggctctgtga
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