Amycolatopsis japonica: AJAP_10870
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Entry
AJAP_10870 CDS
T03225
Name
(GenBank) Hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aja
Amycolatopsis japonica
Pathway
aja03030
DNA replication
aja03430
Mismatch repair
aja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AJAP_10870
03430 Mismatch repair
AJAP_10870
03440 Homologous recombination
AJAP_10870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aja03032
]
AJAP_10870
03400 DNA repair and recombination proteins [BR:
aja03400
]
AJAP_10870
Enzymes [BR:
aja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AJAP_10870
DNA replication proteins [BR:
aja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AJAP_10870
DNA repair and recombination proteins [BR:
aja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AJAP_10870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
Sulfotransfer_3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIG75064
UniProt:
A0A075URC2
LinkDB
All DBs
Position
complement(2199729..2201450)
Genome browser
AA seq
573 aa
AA seq
DB search
MDTGRRPGAAQLAFDELGTPLRDITFVVFDLETTGTKPGPDGITEIGAVKIRAGEVVGEF
ATFVNPGMPIPPQIVELTGITGAMVYDAPRIERVLPAFLEFISGAVLVAHNAAFDTGFMR
AACEGHGYHWPKTAVVCTVRLARRVISRDETPSYRLSALAALFGARTTPNHRALADARAT
VDVLHALLERVGNLGVHTLEELLDYLPGVTAAQRRKRSLAEHLPSRPGVYLFRGPSDEVL
YVGTSSDLRRRVRQYFTGSESRGRIREMVALAERVDAVECAHALEAAVRELRLIAAHRPM
YNRRSKNPRHAWWVALTEEAFPRLSVVRMPRDGMLGPFRTQTDARSAADTLAGASGLRTC
TQRISATAPSGTPCVLAELGRCGAPCAGLQTAEAYRPGVLAVSGLIAGTDGRPLRAAADQ
LARLSAAEHYEQAAQHRDQLAGLIRAVGRAHRQSALAGIPELIAAGPDGNGGWELAVIRH
GRLASAGVARRGVPPMPVVEMLVASAETVLPGPGPLFGAIPEEIGILLRWLTRPGVRLVR
TTQPWAEPAAVAGGWQEWLDLAASATALERVAG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggacggcggcccggcgcggcgcaactcgccttcgacgagctgggaactcct
ttgcgggacatcactttcgtcgtattcgacctggagaccaccgggacgaaacccggaccg
gacgggatcaccgagatcggcgcggtcaagatccgcgcgggcgaggtggtcggcgagttc
gccaccttcgtcaatcctgggatgccgatcccgccccagatcgtcgagctcaccggcatc
accggggcgatggtctacgacgctccccggatcgagcgcgtgctccccgcgttcctcgaa
ttcatctccggtgccgtgctcgtggcgcacaacgccgccttcgacaccggattcatgcgc
gcggcctgcgaaggccacggctaccactggcccaagacggccgtcgtctgcacggtccgg
ctcgcccgccgggtcatctcccgcgacgagacgcccagctaccggctttccgcgctggcg
gcgttgttcggggcgcgcacgacgcccaaccaccgcgcgctcgccgacgcgcgcgccacc
gtcgacgtcctgcacgcgctgctcgaacgggtgggcaatctcggcgtccacaccctcgaa
gagctgctggactacctgcccggagtgaccgctgcccagcgccgtaaacggtcgctggcc
gagcatctgccgtcgaggcccggcgtctacctgttccgcggcccgagcgacgaggtcctc
tacgtcggcacgtcgtccgatctgcgccgccgggtccggcagtacttcaccggttcggag
agccgggggcggatccgggagatggtcgcgctggccgagcgggtcgacgcggtcgaatgc
gcgcacgcgctcgaagccgccgtccgggagcttcggctgatcgccgcccaccgccccatg
tacaaccgccgttccaagaacccacggcacgcctggtgggtcgcgctgaccgaggaggcg
ttcccacgcctgtcggtggtccgcatgccgcgagacgggatgctggggccctttcgcacc
cagaccgacgcccggtccgccgcggacaccctcgccggcgcctccgggctgcggacgtgc
acccagcgcatctcggcgaccgcgccgagcgggacgccctgtgtcctcgcggaactcggc
cgctgcggagcgccgtgcgccgggctgcagacggcggaggcgtaccggccgggagtgctc
gcggtgtccggtctcatcgccggcacggacggacggccgctgcgggccgccgccgaccag
ctggcccggctctccgcggcggaacactacgaacaggccgcccagcatcgcgatcagctg
gccgggctgatccgcgcggtcggccgggcgcaccggcagtcggcgctggcgggtatcccg
gagctgatcgccgccggtccggacgggaacggcggctgggagctggcggtgatccggcac
ggcaggctcgcgtcggcgggggtcgcgcggcgcggggtgccgccgatgccggtcgtcgag
atgctcgtggcctcggcggagacggtgctcccgggtcccggtccgctcttcggcgcgatc
ccggaggagatcggcatcctcctgcgctggctgacccgtccgggcgtccggctcgtgcgc
acgacacaaccctgggcggagcccgccgccgtcgcgggtggctggcaggagtggctcgat
ctcgcggcgagcgcgacggcactggaacgcgtggcgggctag
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