Amycolatopsis japonica: AJAP_11665
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Entry
AJAP_11665 CDS
T03225
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aja
Amycolatopsis japonica
Pathway
aja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AJAP_11665 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aja03019
]
AJAP_11665 (recQ)
03400 DNA repair and recombination proteins [BR:
aja03400
]
AJAP_11665 (recQ)
Enzymes [BR:
aja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AJAP_11665 (recQ)
Messenger RNA biogenesis [BR:
aja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AJAP_11665 (recQ)
DNA repair and recombination proteins [BR:
aja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AJAP_11665 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AIG75218
UniProt:
A0A075UQF8
LinkDB
All DBs
Position
complement(2364357..2366189)
Genome browser
AA seq
610 aa
AA seq
DB search
MAAPDIGTSEALETLNRVFGYDDFRGDQHAIVEHVIAGGDALVLMPTGGGKSLCYQIPAL
VRPGVGVVISPLIALMQDQVDALRNLGVRAGFLNSTQDYAERNRVEAAFLSGELDLLYLA
PERLSVESTVRLLDRGKISLFAIDEAHCVSQWGHDFRPDYLMLSAVHERWPDVPRIALTA
TATKATHAEIASRLNLEDARHFVASFDRPNIQYRIVGKNSPQRQLLELLRTEHKGDAGIV
YCLSRNSVEKTADFLVENGIPAVPYHAGLDARTRAKHQSRFLREDGLIVVATIAFGMGID
KPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDTSEGSDAH
KRQLSAHLNAMLALCETVECRRVQVLSYFGQRSEPCGNCDTCLAPPETWDGTIPAQKLLS
TIVRLQNERRQKFGAGQIIDILLGKTTPKVTQHRHDSLKVFGIGTELKEPEWRAVVRQLL
AQGLAAVEGDYGSLVLTEGSAEVLNGTRKVQLRREPERAAKAAARSSAKKAAAADMPAEA
APVFELLRSWRAAAAKEQGVPAYVIFHDATLRQIATKRPATLQELGTVSGVGENKLAKYG
EQILETLADA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcccccgacatcggtacctcggaagccctcgaaacgctgaaccgcgtcttcggc
tacgacgacttccgcggcgaccagcacgccatcgtcgaacacgtcatcgcaggcggtgac
gcgctcgtcctcatgcccaccggcggcgggaagtcgctgtgctaccagatccccgccctg
gtccggccgggtgtcggcgtggtgatctcgccgctgatcgcgttgatgcaggaccaggtc
gacgcgctgcgcaacctcggcgtgcgcgcgggattcctgaactcgacgcaggattacgcc
gagcggaaccgggtcgaggccgcgttcctctccggcgagctggacctgctgtacctggcg
cccgagcggctttcggtcgaatcgacggtccggctgctcgaccgcggcaagatctcgctg
ttcgcgatcgatgaggcgcactgcgtctcccagtggggtcacgacttccgtcccgactac
ctgatgctgtccgcggtgcacgagcgctggccggacgtgccgcggatcgcgctcaccgcg
accgccacgaaggcgacgcacgccgagatcgcttcccggctcaacctggaggacgcgcgg
catttcgtcgcgagcttcgaccggccgaacatccagtaccgcatcgtcggcaagaactcg
ccgcagcggcagctgctggagttgctgcgcaccgagcacaagggcgacgcggggatcgtc
tactgcctgtcccggaactcggtcgagaagaccgcggacttcctggtggagaacgggatc
ccggcggtgccctatcacgccggcctcgacgcgcgcacccgcgcgaagcatcagtcgcgg
ttcctgcgcgaagacgggctgatcgtcgtcgcgacgatcgccttcggcatgggcatcgac
aagccggacgtccggtttgtcgcgcatctggacctgccgaagtccgtcgagggctactac
caggagaccggtcgcgcgggccgcgacgggctgccgtcgacggcatggctggcgtacggc
ctccaagacgtcgtccagcagcgcaagatgatcgacacctcggagggatccgacgcgcac
aaacggcagctgagcgcgcacctcaacgcgatgctggcgctgtgcgagacggtcgaatgc
cgccgtgtgcaggtgctgagctacttcgggcaacggagcgagccctgcggcaactgcgac
acctgcctggcgccgccggagacctgggacggcaccatcccggcgcagaagctcctctcg
accatcgtccggctgcagaacgagcggcggcagaagttcggcgccgggcagatcatcgac
atcctgctcggcaaaacgaccccgaaggtgacccagcaccggcacgactcgttgaaggtc
ttcggcatcggcacggagctgaaggagccggagtggcgggccgtcgtgcggcagctcctg
gcgcaggggctcgcggcggtcgagggcgactacggctcgctggtgctgaccgagggcagc
gccgaggtgctgaacgggacgagaaaggtccagctgcggcgcgagccggagcgggcggcg
aaggccgcggcccggtcgagcgcgaagaaggccgcggccgccgacatgcccgccgaggcg
gcgccggtgttcgaactgctgcggtcgtggcgggccgcggcggcgaaggaacagggagtg
cccgcgtacgtgatcttccacgacgcgaccctgcgccagatcgccaccaaacggccggcc
acgctgcaggagctgggcacggtcagcggcgtcggcgagaacaagctcgcgaagtacggc
gagcagatcctcgagacgctcgcggacgcctag
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