KEGG   Amycolatopsis japonica: AJAP_13650
Entry
AJAP_13650        CDS       T03225                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
aja  Amycolatopsis japonica
Pathway
aja03030  DNA replication
aja03410  Base excision repair
aja03420  Nucleotide excision repair
aja03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AJAP_13650 (polA)
   03410 Base excision repair
    AJAP_13650 (polA)
   03420 Nucleotide excision repair
    AJAP_13650 (polA)
   03440 Homologous recombination
    AJAP_13650 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aja03032]
    AJAP_13650 (polA)
   03400 DNA repair and recombination proteins [BR:aja03400]
    AJAP_13650 (polA)
Enzymes [BR:aja01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AJAP_13650 (polA)
DNA replication proteins [BR:aja03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AJAP_13650 (polA)
DNA repair and recombination proteins [BR:aja03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AJAP_13650 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AJAP_13650 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f DUF2330 HHH_2 NYN_YacP
Other DBs
NCBI-ProteinID: AIG75611
UniProt: A0A075UT34
LinkDB
Position
2829555..2832296
AA seq 913 aa
MSPSENTTVANATPATAQAERPKLLLIDGHSMAYRAFFALPAENFKTKTGQTTNAVFGFT
SMLINLLRDEAPTHLAVAFDLSRKTFRSETFAEYKANRSSTPDEFKGQVGLVEDVLRVLG
IPALTKENYEADDIIATLTTQATAEGFDVLICTGDRDALQLVTDQVTVLYPKRGVSEMTR
FTPAAVEEKYGLTPAQYPDFAALRGDPSDNLPSIPGVGEKTAAKWIRQFGSFNELIDRVD
EVKGKVGDALREHLGAVMLNRQLTELIRDVELELGPTMLELRPWDREAVHALFDELEFRV
LRDRLFATLQSAEPEAEEGFEVSGSKLAPGALTEWLSAHTGTDKPVGLAFRTTGASVRSD
LKAITFAAADGEGAYVDVTAMDAEDDKALTAWLADEKIQKIGHELKAPLHAVKARGWTFA
GLVMDTVLAAYLVRPGQRTFELDDLALRYLHRELRSEADTGDGQLSLLDGGAEDMEQKEI
QAELVKARAVAELAGALTKELEELGGAQLLAELELPLLQVITGLEAAGIAVDIEHLTDLE
AHYLSRVTQAAEEAYAVIGKQVNLGSPKQLQVILFDELGMPKTKRTKTGYTTDAEALQSL
FEKTEHPFLQHLLEHRDATRLRTTVEGLIKSVADDGRIHTTLLQTIAATGRLSSVDPNLQ
NIPIRTEEGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSQDEGLIQAFNSGEDLHTF
VASRAFSLPPEEITPELRFRVKAMSYGLAYGLSAYGLSQQLRISTEEAKEQMEAYFSRFG
GVRDYLHSVVGDAAKVGYTETIFGRRRYLPDLNSDNRQRREMAERMALNAPIQGSAADII
KVAMLNVHKALTEAKLKSRVLLQVHDELVLEVAEGEREQLEALVRQGMGSAYELAVPLEV
SVGYGRSWNDAAH
NT seq 2742 nt   +upstreamnt  +downstreamnt
gtgagcccgagtgagaacacgaccgttgccaacgccacacccgccaccgcacaggccgag
cggcccaaactgctgctgatcgacggccattcgatggcgtatcgcgccttcttcgcgctg
cccgcggagaacttcaagacgaagaccgggcagacgacgaacgcggtcttcgggttcacc
tcgatgctcatcaacctgctgcgcgacgaggcgccgacccatctggcggtggcgttcgac
ctctcccgcaagacgttccggtcggagacgttcgcggagtacaaggccaaccgcagcagc
accccggacgagttcaagggccaggtcgggctggtcgaggacgtgctcagggtcctcggc
atcccggcgctgaccaaggagaactacgaagccgacgacatcatcgccacgctcacgaca
caggcgaccgccgaaggtttcgacgtcctcatctgtacgggcgaccgtgacgcgctccag
ctggtgaccgaccaggtcaccgtgctgtacccgaagcgcggcgtgtcggagatgacccgg
ttcaccccggcggcggtcgaggagaagtacggcctcacgccggcgcagtacccggacttc
gccgcgctgcgtggcgacccctcggacaacctgcccagcatccccggcgtgggggagaag
acggccgcgaagtggatccggcagttcggctccttcaacgagctgatcgaccgggtcgac
gaggtcaagggcaaggtcggcgacgcgctgcgcgagcacctcggcgcggtgatgctgaac
cgccagctcaccgagctgatccgcgacgtcgagctggagctcggcccgacgatgctcgag
ctgcgcccgtgggaccgcgaggccgtccacgcgctgttcgacgagctcgagttccgcgtc
ctgcgagaccggctcttcgccactctgcagagcgccgagcccgaggccgaggagggtttc
gaggtcagcggttcgaagctcgcgccgggcgccctcaccgaatggctgtccgcgcacacc
ggcacggacaagccggtcggcctggcgttccggaccaccggtgcctcggtccgctcggac
ctgaaggccatcaccttcgcggccgcggacggcgaaggcgcgtacgtcgacgtcaccgcg
atggacgccgaggacgacaaggcgctcacggcctggctcgccgacgagaagatccagaag
atcggtcacgagctcaaggcccccctgcacgccgtcaaggcacgaggctggacgttcgcc
gggctcgtcatggacaccgtgctcgcggcgtatctggtccgtcccggccagcgcaccttc
gaactcgacgacctcgccctgaggtacctgcaccgtgagctccggtccgaggccgacacc
ggggacgggcagctttcgctgctcgacggcggcgccgaggacatggagcagaaggagatc
caggccgagctggtcaaggcccgcgcggtcgccgagctcgccggcgccctgaccaaggag
ctcgaagaactgggcggcgcgcagctgctcgccgagctcgaactgccgttgctgcaggtg
atcaccgggctggaagcggcgggtatcgcggtcgacatcgagcacctgaccgacctggaa
gcgcattacctcagccgggtgacgcaggccgcggaggaggcgtacgcggtcatcggcaag
caggtcaacctcggttcgccgaagcagctgcaggtcatcctgttcgacgagctcggcatg
ccgaagaccaagcgcaccaagaccggctacaccaccgacgccgaggcgctgcagagcctg
ttcgagaagaccgagcacccgttcctgcagcatctgctggagcaccgggacgcgacccgc
ctgcgcaccacggtcgagggtctgatcaagtcggtcgccgacgacggccgcatccacacc
acgctgctgcagacgatcgccgccaccgggcggctctcgtcggtcgacccgaacctccag
aacatcccgatccgcaccgaagaaggccgccgcatccgcgacgcgttcgtcgtcggcgac
gggtacgccgagctgatgacggcggactacagccagatcgaaatgcggatcatggcgcac
ctttcgcaggacgagggcctgatccaggccttcaacagcggcgaggatctgcacactttc
gtggcgtcgcgcgcgttctcgctgccgccggaggagatcacgccggagctgcggttccgg
gtcaaggcgatgtcgtacggcctggcgtacgggctttcggcgtacggcctttcgcagcag
ctgcggatctccaccgaggaagccaaagagcagatggaggcgtacttctcccgcttcggc
ggcgtgcgcgattacctccattcggtcgtgggcgacgcggcgaaggtcggctacaccgag
actatcttcggccgccgccgctatctgcccgacctcaacagtgacaaccggcagcgccgg
gaaatggccgagcggatggcgctcaacgcgcccatccagggcagcgcggccgacatcatc
aaggtcgccatgctcaacgtgcacaaggcgctgaccgaggcgaaattgaagagccgcgtg
ctgctgcaggtccacgacgagctcgttctcgaggtcgccgaaggcgaacgcgagcagctg
gaagcgttggtgcgccagggaatgggttcggcctacgagctggcggtcccgctcgaggtc
tccgtcgggtacgggcggtcctggaacgacgccgcgcattag

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