Amycolatopsis japonica: AJAP_35715
Help
Entry
AJAP_35715 CDS
T03225
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aja
Amycolatopsis japonica
Pathway
aja03420
Nucleotide excision repair
aja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AJAP_35715 (uvrD)
03430 Mismatch repair
AJAP_35715 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aja03400
]
AJAP_35715 (uvrD)
Enzymes [BR:
aja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AJAP_35715 (uvrD)
DNA repair and recombination proteins [BR:
aja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AJAP_35715 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AJAP_35715 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Terminase_6N
AAA_22
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIG79950
UniProt:
A0A075VAQ0
LinkDB
All DBs
Position
complement(7644573..7646981)
Genome browser
AA seq
802 aa
AA seq
DB search
MNTLFDLPADGPAKPRHSDLLDDLNPAQREAVTHAGSPLLVVAGAGSGKTRVLTRRIAYL
LAERDVHPGQIMAITFTNKAAAEMRERVSDLVGRRANAMWVSTFHSMCVRILRREAKTLE
MSSSFSIYDSDDTKRLITLVARDLDIDPKRYAARTLAVHISNLKNELIDPETAVADAGND
LERRVAEVYVEYQRRLNQANAFDFDDLIMRTVELLQTFPDVAEYYRRRFRHVLVDEYQDT
NHAQYTLVRELVGTEANEAGIEPAELCVVGDADQSIYAFRGATIRNIEEFERDFPNARTV
LLEQNYRSTQTILNAANAVIARNPNRRAKRLWTDSGDGEKIVGYVADNEHDEAAFVAGEI
DALADKGEADYSDVAVFYRTNNQSRVFEEIFIRLGLPYKVVGGVRFYERREVRDMLAYLR
VLANPEDTVSLRRILNVPKRGIGDRAEAVIATYAERERISFAQALRGAVSGEVPLLNPRS
AKAITGFVELMDELGEVVESGAEVADILEAVLERTGYRAELEESDDPQDASRVENLTELV
TVAREFTEFTAEVAGPDGELPEADPGVPEPGSLPAFLERVSLVADADSVPSPDGGDDGDG
HDAGVVTLMTVHTAKGLEYPVVFGTGWEDGIFPHMRALGDPTELAEERRLAYVAITRARK
RLYVSRSMVRSAWGQPQMNPASRFLDELPADLVDWRRLAPSSSSGGFGSSGGSPRAATTW
GSRGGGGGASSRAASTSPFGKGWKDTVALKLDVGDRVSHDKYGLGTVVACDGAGPRATAT
IDFGAAGKVRLMLIGSVPMVKL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccctcttcgatctcccagcggacggtccggccaagccccggcactcggatctg
ctcgacgacctgaacccggcacagcgcgaagccgtgacccacgcgggctcgccgctgctg
gtcgtcgcgggcgcgggttcgggcaagacccgggtgctgacccgccggatcgcgtacctg
ctggccgaacgggacgtccaccccggccagatcatggcgatcacgttcaccaacaaggcg
gccgcggagatgcgggagcgggtgagcgacctcgtcggccgccgcgcgaacgccatgtgg
gtgtcgacgttccactcgatgtgcgtgcggatcctgcgccgtgaggccaaaacgctggag
atgtcgtcgagtttctccatctacgactcggacgacacgaagcggctcatcaccctcgtc
gcccgcgatctcgacatcgacccgaagcggtacgcggcgcgcacgctggccgtgcacatc
tcgaacctcaagaacgaactgatcgatccggagacggcggtcgccgacgcgggcaacgac
ctcgaacgccgcgtcgccgaggtgtacgtcgagtaccagcggcggctgaaccaggccaac
gcgttcgacttcgacgacctcatcatgcggacggtcgaactcctgcagaccttcccggac
gtcgccgagtactaccggcggcgcttccggcacgtgctcgtcgacgagtaccaggacacg
aaccacgcgcagtacacgctggtccgcgaactggtcggcaccgaggcgaacgaggccggg
atcgagcccgccgagctgtgcgtcgtcggtgacgcggaccagtcgatctacgccttccgc
ggggcgacgatccgcaacatcgaggaattcgagcgcgacttcccgaacgcgcggaccgtg
ttgctggaacagaactaccgctcgacccagacgatcctgaacgcggcgaacgcggtcatc
gcgcgaaacccgaacaggcgcgcgaagcggctgtggaccgattccggtgacggcgagaag
atcgtcggctacgtcgcggacaacgagcacgacgaggcggcgttcgtcgcgggcgagatc
gacgcgctggcggacaagggcgaagcggactactccgacgtcgcggtcttctaccgcacc
aacaaccagtcccgtgtcttcgaagagatcttcattcgcctcggcctgccgtacaaggtc
gtcggcggggtgcggttctacgagcggcgcgaggtccgcgacatgctcgcgtacctgagg
gtgctggcgaacccggaggacacggtcagcctgcgccgcatcctcaacgtccccaaacgc
ggcatcggggatcgcgccgaagccgtcatcgcgacgtacgccgagcgtgagcgcatctcg
ttcgctcaggcgctgcgcggtgccgtcagcggtgaagtgccgctgctgaacccgcgttcc
gccaaggcgatcaccggtttcgtcgagttgatggacgagctcggcgaggtcgtggagagc
ggcgccgaagtcgccgacatcctcgaagccgtccttgaacgcacgggttaccgcgcggaa
ctcgaggagtccgacgacccgcaggacgcgtcacgggtggagaacctgacggaactcgtc
accgtcgcgcgggagttcaccgaattcaccgccgaggtcgccggtccggacggcgagctg
ccggaggcggacccgggtgtgccggagccgggctcgctgcccgcgttcctggagcgggtt
tcgctggtggccgacgcggattcggtcccgtcgcccgacggcggcgatgacggcgacggg
cacgacgcgggtgtggtcacgttgatgacggtgcacaccgcgaagggcctggagtacccg
gtcgtcttcggaacgggctgggaagacgggatcttcccgcatatgcgcgcgctcggtgac
ccgacggagctggccgaggaacgccggctcgcctatgtcgcgatcacgagggcgaggaag
cggctgtacgtctcccgttcgatggtgcgctcggcttggggccagccgcagatgaacccg
gcttcgcggttcctcgacgagcttcccgccgatctggtggattggcgcaggctcgcgcct
tcctcttcctccggtggtttcggttcgtcgggcggatcgccgcgggccgcgacgacctgg
ggcagccgaggcggtggcggcggcgcgtcgtcgcgggcggcgagcacgagtccgttcggc
aagggctggaaggacaccgtcgcgctcaagctcgacgtcggcgacagggtcagccacgac
aagtacgggctcgggacggtcgtcgcctgcgacggcgcgggcccgcgtgccacggcgacg
atcgatttcggtgccgccggcaaggtccgcctgatgctgatcggcagcgtcccgatggtc
aaactctag
DBGET
integrated database retrieval system
