Amycolatopsis japonica: AJAP_36160
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Entry
AJAP_36160 CDS
T03225
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aja
Amycolatopsis japonica
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aja03016
]
AJAP_36160 (truA)
Enzymes [BR:
aja01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AJAP_36160 (truA)
Transfer RNA biogenesis [BR:
aja03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AJAP_36160 (truA)
Prokaryotic type
AJAP_36160 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AIG80039
UniProt:
A0A075V6E9
LinkDB
All DBs
Position
complement(7741846..7742679)
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AA seq
277 aa
AA seq
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MDVSYDGTDFSGWARQPGRRTVQGVLEEALAKQPPGASVPKSVVVAGRTDAGVHAAGQVV
HVDASPLAGKTRSGRLELDEQGIPDLGRMRHRWNRYLPGDVRVLDARVAAPGFDARFSAV
RRHYLYRVSDAPWGVDPLRRHDTLAWGRPLSVDAMNEASAALLGLQDFAAFCKQREGGTT
IRELQRLVWRRTGPHAVEVEVSADAFCHSMVRSLVGALLLVGDGRRPLDWPGDVLESRTR
DSAVAPAHGLTLMAVDYPPDAELAARADQTRAMRTPS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
ttggacgtctcctacgacggcaccgatttctccggctgggcgcggcagcccggacggcgc
acggtgcagggagtcctcgaagaggcgctcgcgaagcagcccccaggggcctcggtcccg
aagtccgtcgtcgtcgccggccgcaccgacgccggtgtgcacgctgcgggccaggtggtc
cacgtcgacgcgtcgcctttagcgggcaaaacgcgatccggtcgtctggaactggacgag
cagggcatccctgacctggggcggatgcggcaccgctggaatcggtacctgccgggtgac
gtgcgggtgctggatgcccgggtggcggcacccggattcgacgcgcggttctcggcagtg
cggcgccactatctgtaccgcgtttcggacgcgccgtggggcgtggatccgttgcggcgt
cacgacaccttggcctgggggcggccgctttccgtcgacgcgatgaatgaggcgtcggcg
gctctcttggggctccaggacttcgccgcgttctgcaagcagcgtgaaggcgggacgacc
attcgcgagctgcagcggctcgtgtggcggcggaccgggccgcacgcggtcgaggtcgag
gtctccgccgatgcgttctgccattcgatggtgcgcagtctggtgggggcgctgctcttg
gtcggtgacggcagacgtccgctcgattggccgggtgacgttttggagagccggacgcgc
gacagcgcagtcgctcccgcacatggcctgacgttgatggccgtcgactacccgccagac
gccgaactcgcggcgcgtgccgatcaaacgcgcgccatgcgcaccccctcctga
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