Amycolatopsis japonica: AJAP_39475
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Entry
AJAP_39475 CDS
T03225
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aja
Amycolatopsis japonica
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aja03032
]
AJAP_39475 (topA)
03400 DNA repair and recombination proteins [BR:
aja03400
]
AJAP_39475 (topA)
Enzymes [BR:
aja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AJAP_39475 (topA)
DNA replication proteins [BR:
aja03032
]
Prokaryotic type
DNA Topoisomerases
AJAP_39475 (topA)
DNA repair and recombination proteins [BR:
aja03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AJAP_39475 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AIG80675
UniProt:
A0A075VCP9
LinkDB
All DBs
Position
complement(8382929..8385868)
Genome browser
AA seq
979 aa
AA seq
DB search
MHTDGSRGGAKAPKMSGEQDSVAGARTKKTAASDDGAGRRRLVIVESPTKARKIAPYLGG
NYVVESSVGHIRDLPRGAADVPAQYKGESWARLGVDVDNDFKALYVVTPDKKSKVTELKG
LLKDVDELYLATDPDREGEAIAWHLLETLKPKVPVRRMVFHEVTEQAIRAAADSTRELDG
DLVDAQETRRILDRLYGYEVSPVLWKKVMPKLSAGRVQSVATRIVVERERERMRFTSASY
WDISATMDAGAEASPRNFPARMIAVDGARLATGRDFGSDGQLKASNNEIRVLAEADAVRL
AEALKNRDFKVASVEEKPYTRKPYAPFMTSTLQQEAGRKLRFTSERTMRIAQKLYENGYI
TYMRTDSTTLSESAISAARSQATQLYGKEYVSPSPRQYTRKVKNAQEAHEAIRPSGEVFR
TPGQVAKDLDTDEYRLYEMIWQRTIASQMADAKGTTMSVRIVGTATSGEECTFASSGRTI
TFAGFLKAYVEAVDTESGGEADDKQSRLPQLVKDQALTATELSPDGHTTSPPARYSEPSL
VSKLEELGIGRPSTYASIIKTIQDRGYVWKKGSALVPSWVAFAVIGLMERHFERLVDYDF
TAGMEDELDRIAAGDEHRTQWLSKFYFGGDMGVDGSVGRLGGLKKLVGSGVEDIDAREIN
SIPLFSDADGHTVVVRVGRYGPYLEREVDGTSQRANLPEDLPPDELTKEIAEKLFATPQE
GRVLGKDPVSGHEIVAKEGRFGPYVTELLPEPEPLPEGATAAQKKAAKAKQPKPRTGSLF
KSMSIETMNLEDALKLLSLPRVVGKDPESGDEITAQNGRYGPYLKKGTDSRSLTTEDQLF
SITLEEALKIYSEPKQRGRSATAKPPLKELGDDPVSGKPMVVKDGRFGPYVTDGEYNATL
RKSDSIEELTAERAAELLAEKRAKGPAPKRKAPARKPAASKTAATKTTAAKKTTATKTAA
AKSTAAKKPSTRSTATKTK
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
gtgcacactgacgggtcgagaggcggcgcgaaggcgccgaagatgagcggagagcaggac
agcgtggcaggagcacggacgaagaagaccgcggcgtcggacgacggcgcgggccgtcgt
cggctggtgatcgtcgagtcgccgaccaaggcccgcaagatcgccccgtacctcggcggt
aactacgtcgtggagtcctccgtcggacacatccgcgaccttccccgcggcgcggccgac
gtgcccgcccagtacaaaggcgagtcgtgggcacggctgggtgtcgacgtcgacaacgac
ttcaaggcgctctacgtcgtcacgccggacaagaagtccaaggtcacggagctgaagggc
ctgctgaaggacgtcgacgagctctacctcgccacggaccccgaccgcgagggcgaggcc
atcgcgtggcatctgctggagaccctcaagccgaaggtcccggtgcgccggatggtcttc
cacgaggtcaccgagcaggcgatccgcgccgcggccgacagcacccgtgagctcgacgga
gacctcgtcgacgcgcaggagacccgccgcatcctggaccggctctacggctacgaggtc
tcgcccgtgctgtggaagaaggtcatgccgaagctttcggcgggccgcgtgcagtcggtg
gcgaccaggatcgtggtcgagcgggagcgcgagcgcatgcgcttcacctcggcgtcgtac
tgggacatctccgcgacgatggacgccggtgccgaggcgtccccccgtaacttcccggcc
aggatgatcgccgtcgacggcgcccggctggccacgggccgtgacttcggttcggacggg
cagctcaaggcttcgaacaacgagatccgcgtgctggccgaggccgacgccgtccggctg
gccgaggcgctgaagaaccgcgacttcaaggtcgcgagcgtcgaggagaagccgtacacg
cgcaagccgtacgcgcccttcatgacctcgaccctgcagcaggaggcaggccgcaagctg
cggttcacctccgagcgcaccatgcggatcgcgcagaagctgtacgagaacgggtacatc
acttatatgcgtaccgactccacgacgctgtcggagtcggcgatctcggcggcgcgcagc
caggcgacgcagctgtacggcaaggaatacgtctcgccgtcgccgcgccagtacacccgc
aaggtgaagaacgcgcaggaagcccacgaagcgatccgtccttcgggtgaggtcttccgc
acgccgggccaggtcgcgaaggatctggacaccgacgagtaccgcctttacgagatgatc
tggcagcgcacgatcgcgtcgcagatggcggacgcgaagggcaccacgatgtcggtgcgc
atcgtcggcacggccaccagcggcgaggagtgcacgttcgcctcgtcgggtcgcacgatc
accttcgccgggttcctcaaggcgtacgtcgaggccgtcgacaccgaaagcggtggcgag
gccgacgacaagcagagccgtctgccgcagctggtcaaggaccaggcgctgaccgcgacc
gagctgagcccggacgggcacaccacgtcgccgccggcgcgctactcggagccgagcctg
gtcagcaagctcgaagagctgggcatcggccgcccgtcgacgtacgcgtcgatcatcaag
accatccaggaccgcggctacgtgtggaagaagggctccgcgctggtgccctcctgggtc
gcgttcgccgtgatcggcctgatggagcggcatttcgagcggcttgtcgactacgacttc
accgccggcatggaggacgagctcgaccgcatcgccgccggtgacgagcaccggacgcag
tggctgtcgaagttctacttcggcggcgacatgggtgtcgacggttccgtcggccgtctc
ggcgggctgaagaagctggtcggctcgggtgtcgaggacatcgacgcccgcgagatcaac
tcgatcccgctgttcagcgatgccgacgggcacaccgtcgtcgtgcgcgtcggccgctac
ggcccgtacctcgagcgcgaggtggacgggacgtcgcagcgggcgaacctgcccgaggac
ctgccgccggacgagctgaccaaggagatcgcggagaagctgttcgcgacgccgcaggaa
ggccgcgtgctcggcaaggacccggtcagcggacacgagatcgtggcgaaggaaggccgc
ttcggcccgtacgtcaccgagctcctgcccgagccggagccgctgcccgaaggcgcgacc
gccgcgcagaagaaggccgcgaaggcgaagcagccgaagccgcggacgggttcgctgttc
aagtccatgtcgatcgagacgatgaacctcgaagacgcgctgaagctgctttcgctgccg
cgcgtcgtcggcaaggacccggaatccggcgacgagatcaccgcgcagaacgggcgctac
gggccgtacctgaagaagggcacggactcgcgttcgctcaccaccgaggaccagctgttc
tcgatcacgctcgaagaggcgctgaagatctactcggagccgaagcagcgtggccggtcg
gcgaccgcgaagccgccgctgaaggaactgggcgacgacccggtgtccggtaagccgatg
gtcgtcaaggacggccgcttcggtccgtacgtgaccgatggcgagtacaacgcgacgctg
cggaagtcggacagcatcgaggagctgaccgccgagcgtgccgccgaactgttggcggag
aagcgcgcgaagggcccggcgcccaagcgcaaggccccggcgcgcaagccggcggcgtcg
aagacggcggccaccaagacgaccgcggccaagaagaccaccgcgaccaagaccgcggcg
gcgaagtcgacggcggcgaagaagccttcgacgcgctcgacggccacgaagacgaagtag
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