Anneissia japonica (feather star): 117100403
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Entry
117100403 CDS
T08613
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ajc
Anneissia japonica (feather star)
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajc03021
]
117100403
Transcription machinery [BR:
ajc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117100403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_16
TPR_17
TPR_11
TPR_10
TPR_7
ARM_TT21_5th
TPR_6
TPR_9
TPR_Slam
ANAPC3
ARM_TT21_4th
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
117100403
NCBI-ProteinID:
XP_033095970
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MASVEIPLKDTDEVIELDLDQLPDGEEVLSILKQENAPLHTWITLGLEYYKQGKVDDFVK
IFESWQNDANCNYSGGDKDQMTALDTLAAYYVQQARKEKNKERKKDLFTQATLLYTMADK
IIMYDQNHLLGRACFFLLEGDKMDQADAQFNFVLNQDASNIPALLGKACISFNRKDYRGA
LAYYKKALRTNPNCPAAVRLGMGHCFMKLGKFEKARLAFERAMALDPKSVGTIVGLAVLE
LNSKEPDSIKNGVQLLSKAYTIDSGNPMVLNHLANHFFFKKDYSKVQHLALHAFHGTENE
SIQAESCYQLARSFHVQSDFDQAFQYYYQSTQFASSQFVLPHFGLGQMYIYRGDSENAAQ
CFEKVLKAQPGNYETMKILGSLYASSKDEAKREIAKGHLQKVVDQFPDDVEAWIELAQIL
EITDVQGALSAYGTATRILKEKVQADVPPEILNNVGALHYRLGNLQESKRYYEASLERSR
SESPHDETYYSAISVTTTYNLGRLYEGMCRYDKAEKHYKTILGDHPNYIDCYLRLGCISR
DRGQIYEASDWFKEALSINQDHPDAWTLIGNLHLAKQEWGPGQKKFERIIKQTSTQNDTY
SLLALGNVWLQTLYQPTRDKEKEKRHQDRALMMYKQVLRLDKRNLYAANGVGSILAMKGY
MREARDIFSQVREATADVSDVWLNLAHIYVEQRQYISAIQMYENCIKKFYKHHNVEVLSY
LARAYFKAGKLRECKYALLKARRVSPHDSVLLFNLALVLQRIATSVLKQEKSNLKTVLSA
VSELETAQRYFTYLSKAGDRMRFDLNKAAAEARQCSDLLNQAQYHVRRARKQDEEERSIR
QKQEEERSALRQKHQEEELAKQQAEQQKAQEMLEKRAQFIEKTKKLLILPEIKPEKKGRK
GKRSKDGEIFSEGSESENEERPKPKKKRRKKSDDEGDGQERKGKKRKRQRKRGEGYDDDD
DEEAPRKSRKERRAPKPKKKESDQLTAAQRRKVKSKAMVSSSDSESDGEKLKIVEEEYSA
SDGEQKKTPAPRGRIRRRLASDSSDSDESGADEKQANESGADNSDANDQNHGSDQEEGQG
SDQASDVEAQDSNEGSAQGSDEERSGGEESNAGSDNEEVKEAGSDDDVERDSGEEQASGG
EEQASGGEEQASGGEEQASGGEVSGEDANQEASEAEQSADDSD
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggttgaaatcccgttgaaagatactgatgaagtgatagagttggacctcgac
cagcttcctgatggtgaggaggtgttgagtattctaaagcaggaaaatgcacctctacat
acatggatcacacttgggctggaatactacaagcaaggcaaggtggatgatttcgtcaaa
atctttgaatcatggcagaatgatgccaactgcaattattctggtggcgataaagaccag
atgactgcgttggacacacttgcagcttactatgtgcaacaagcacgcaaagagaagaac
aaagaaaggaaaaaggacctgtttactcaagcaacccttctctacaccatggcagataaa
attattatgtacgaccagaaccatttgctagggagagcgtgcttttttctgctcgaaggt
gataaaatggaccaagccgacgcccaattcaactttgtactgaatcaagacgcttcaaat
atccccgcactccttggtaaagcttgtatctcctttaacaggaaggactacagaggcgca
ttggcctattataagaaagcactcaggaccaatcctaactgcccagctgctgttaggcta
ggcatgggacattgcttcatgaaacttggaaagttcgagaaggcaaggttagcgtttgag
cgagccatggcacttgatccaaaaagtgttggaactatagtaggcctagctgtgctagag
ctgaacagcaaagaaccagattccattaagaatggcgtacaacttctctcgaaggcatac
accattgattctggaaaccccatggttctgaatcatttggctaatcattttttctttaaa
aaggactacagcaaagtgcagcatcttgcactgcacgcattccatgggactgagaatgaa
tcgatccaggcggaaagctgctaccagttggcaaggtcattccatgttcagagtgatttt
gaccaggctttccagtattattatcagtcaactcagtttgcttcatctcagtttgtacta
ccgcactttggtttggggcagatgtatatctacagaggagactccgaaaatgctgctcag
tgctttgagaaagtgttgaaagctcagccaggcaactatgagacaatgaagattcttggc
tcgctgtatgcttcctcaaaggatgaagcaaaaagggaaatcgccaaaggccatcttcag
aaagttgtcgaccagttcccagacgatgtggaagcctggattgaactggcacagattctg
gagattacggatgttcagggtgccctgtctgcatatggaacagccacaaggattctgaag
gaaaaggtacaagccgatgttccccccgagattctcaacaatgtaggggccctgcactac
cgactgggtaaccttcaagaatcaaagcgttactatgaagcatcactcgagcgttcacga
agcgagtcaccgcatgatgagacatactacagcgctatatcagtaacaaccacctacaac
ctaggccgtctttacgagggaatgtgccgttatgataaggcagagaagcactacaagacc
attcttggtgaccatcctaattacattgactgctaccttagattaggttgtatttcacgt
gaccgaggacaaatctatgaagcttctgattggttcaaagaggctctgtcaatcaatcag
gaccaccctgatgcctggactctgatcggcaacctgcatttagccaagcaggagtgggga
cctggacagaagaagtttgaacgtatcatcaagcaaacctcaacacagaatgatacgtat
tccctgctagcattgggtaatgtctggttacaaaccctctaccaaccaacaagggacaaa
gaaaaggaaaaacgacatcaggaccgagcattgatgatgtacaaacaagtattacgattg
gataaaaggaatttgtacgcagccaatggcgtagggtctattctggctatgaagggctat
atgagagaggccagagacatattttcacaggttcgtgaagcaacagcagatgtcagtgat
gtgtggttgaacttggcgcacatatatgtcgaacagagacagtacatcagtgcaattcaa
atgtatgagaactgtatcaagaagttttacaaacatcataacgttgaggtgttatcgtac
ctggccagagcttatttcaaggccggtaaactacgtgaatgcaagtatgctcttctcaag
gcccggcgtgtgtcacctcacgactcggttctactgttcaaccttgctctggtgctgcag
cgtattgctactagcgtattgaagcaggagaagagtaatctgaagacggtgcttagcgcc
gtctccgagcttgagacggctcagcggtacttcacatacctgagcaaagcaggggatagg
atgaggtttgacctcaacaaagctgcagctgaagctaggcaatgctctgatctcctgaat
caagcacagtaccatgtaagaagagctcgtaagcaggacgaagaagagagatccatccga
caaaaacaggaagaggaacgttcagcacttcgccagaaacaccaagaggaagagcttgct
aagcaacaagctgagcaacagaaggcgcaagaaatgttggagaagagagcgcagtttatt
gagaagaccaagaaactgcttatccttccagagatcaaaccagaaaaaaaaggaagaaag
ggaaagagatcaaaagatggagaaatcttcagcgaaggcagtgagagtgaaaatgaagaa
aggccaaaaccaaaaaagaagagaagaaagaagagtgatgatgaaggtgatggccaagag
aggaaaggcaagaaaagaaaaagacaaaggaagcgtggagaaggatacgatgatgacgac
gatgaagaagcgcctcgtaaatcgcgcaaagagcgcagagccccaaaaccaaaaaagaag
gaatcggaccaactgactgccgcgcagcgtaggaaggtgaaatcaaaggctatggtatct
tccagtgattctgaatcagatggcgagaaactcaaaatcgttgaagaagagtacagtgcc
agtgatggagagcaaaagaaaactccagcaccacgtggacgcatccgccgcagacttgca
tccgattcctctgacagcgatgaaagtggggccgacgaaaaacaggctaatgaatcaggt
gctgataactctgacgctaatgaccagaatcatggatcggatcaagaggaaggtcagggg
tcagaccaagcatctgatgtggaagcccaagattccaacgaagggtcagctcaagggtca
gatgaagaaaggtcaggtggtgaagaatcaaatgccggatcagataatgaagaagtgaaa
gaagcagggtcagatgatgacgttgaaagagattctggtgaggaacaagcgtcagggggc
gaggaacaagcatcagggggcgaggaacaagcatcagggggcgaggaacaagcgtcagga
ggtgaagtatcaggtgaagatgccaatcaggaagccagtgaagcagaacaatcagcagat
gatagtgattag
DBGET
integrated database retrieval system
