KEGG   Anneissia japonica (feather star): 117101306
Entry
117101306         CDS       T08613                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc03020  RNA polymerase
ajc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117101306
  09124 Replication and repair
   03420 Nucleotide excision repair
    117101306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ajc03021]
    117101306
   03019 Messenger RNA biogenesis [BR:ajc03019]
    117101306
   03400 DNA repair and recombination proteins [BR:ajc03400]
    117101306
Transcription machinery [BR:ajc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117101306
Messenger RNA biogenesis [BR:ajc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117101306
DNA repair and recombination proteins [BR:ajc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117101306
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 117101306
NCBI-ProteinID: XP_033097164
LinkDB
Position
Unknown
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGMIQ
PGKGFVLYPIKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPLSCFVSRHSIPSDMEFD
PNSNPPCYKTKDEDMVIQQEDEIRLKIVGTRVDASDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttatcatatatctttggaacatgagattcttttacatcctcgctattttggtcca
aatcttttgaacaccgtcaaacagaagttgtttacagaggtagaaggaacgtgtacagga
aaatatggttttgttatagcagttacaactattgacaatattggagctggtatgattcag
cctggcaaaggatttgtgctctacccaatcaaatacaaagctatcgtgttccgacctttc
aaaggagaagtcgtagatgcagtagtgacgcaagtaaacaaggttggtcttttcaccgag
attggccctctctcttgctttgtatcaagacattccattccatctgacatggagtttgat
cccaactcaaatccaccttgttataaaaccaaagatgaggatatggtgattcagcaggag
gatgaaattaggttaaagattgtgggaaccagggtagatgcctcagatatttttgcaatt
ggatcactcatggatgattacctcggtcttgtgagctag

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