Anneissia japonica (feather star): 117103545
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Entry
117103545 CDS
T08613
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117103545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajc03021
]
117103545
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117103545
Transcription machinery [BR:
ajc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117103545
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
117103545
U7-dependent histone pre-mRNA processing factors
117103545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
117103545
NCBI-ProteinID:
XP_033100006
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MSTNNRRSIASQFFAEEDSDTSQANAKQISTADKVVELINETQLLTKDSQKINNLKQVQE
LIVNKDPNLLDNFLDEVLQFQNDKSADVRKFVVGFIEEACKKDNELLVTVVMHLNMILSD
PAQNVAVLKRVILCNAQLYRVAMKWILKSKTIQEEKEAMWQNFKDMKSKIKAMLDSENDG
VRTHAIKFMEMLIVTSSPRTADSDVPKRMENEISLDQIPEDHQILKHRYIKADGLNGMDL
LLKLMATPSITSVNLIACMGTVTSICKQRPMFMKNVTESLEALHANLPPTLAKSQVSSVR
KNLKLHLFSILRHPSSETFHPRIITLLQDLGASDHEITVLGGSSGSSENFRQPSQFAVPK
GMKRIRQFKLSEVTKPISASLQERMMTMALQRILDSGKNLKGPASQARNKMIVLLTTQFG
GELVNVLQDYILSDLRVHIDLAFAWLYQEYAKYRGYMLLLADEMPSLEQYDSLLCNILAS
LLVRDDQRDGVFARLGLESPLITPNALKIIKRFCEHEVHFFVGLQTLRDIILKRPANMER
YLDNMLELTWNEKIEVRSQATQYVKRFYEKPDMRQHIENYATKSLRHLKSEKPPASLVLT
LSSPEQRVEASKTWTEDTAKICLNVYLALLPINHKLIHELATVYVAASATIKRVVLRNLE
SPVRGMGMSSPELLTLLETSPKGAETLITRMLHILTDKVPPSQDLVRRVRDLYQKRVPDV
RFLIPVLIGLEKSEVMAALPKLIKLNPNVVKEVFHRLLMSHQEGGLGQSPLTPAELLVAL
HNLDMSKCDMKSVIKATSLCFSQKNIYTQEVLAVVMQQLMEQTPIPTLLMRTVIQSLSMY
PRLIGFAMNILQRLIVKQVWRYPKVWEGFIKCCERTKPQSFQVLLQLPPSQLTLMFETSP
DLRLPLLEHVKSFTPHQQAHIPKTIMTVLETDAIEAKRKREQEEMDRKRREKEEEERKKK
AAEEKARQQRLLQEKIERERRMKEEEAKAKKRKEMEEKALNEIKARLQADKEKKEEEE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaacaaccgtcgttctatagcatcccaattttttgctgaagaagattctgat
acaagccaagctaacgctaaacagattagtaccgcagacaaggttgttgaattgatcaat
gaaactcagcttttgaccaaagactcgcaaaagataaacaatttgaagcaagtgcaggag
ttaattgtcaataaggatcctaatttacttgacaattttcttgatgaggttcttcagttt
cagaatgacaaatctgcagatgttaggaaatttgtagttggcttcatagaggaagcctgt
aaaaaggacaatgaattacttgttactgttgtaatgcacttaaacatgattttaagtgat
ccggctcagaatgtagcagtcctcaagagggttatattgtgcaatgcgcaactctaccga
gtggcaatgaagtggattttaaaatcaaaaaccatacaagaggagaaggaagccatgtgg
cagaattttaaagatatgaagtccaagataaaggcaatgttagattcagaaaatgatggt
gttcgtacacatgccattaaattcatggagatgttgattgttacatcatctccaagaact
gcagattcagatgttccaaaaagaatggaaaatgagatatcccttgaccagattcctgaa
gaccaccaaattttgaagcaccgttatataaaggctgatggactgaacggcatggacctg
ctactgaaactgatggctacgccaagtattacaagtgtgaatctgatagcgtgtatgggg
acagtgacctccatctgtaagcaaagacctatgtttatgaaaaatgttacagaaagttta
gaagctctacatgcaaacctgcccccaacgttagccaagtctcaggtcagcagtgtacgc
aagaatctaaaacttcacctattttctatactacggcatccatcttcagagacttttcat
cctcgcattataacactcttacaagatctcggtgcaagtgatcatgagataacagtacta
ggaggatctagtggctcaagtgaaaacttccgacaaccctcgcaatttgcagtaccaaaa
ggaatgaagcgaatcagacaatttaaactctcagaagtgacaaagcctatcagtgccagc
ctgcaggaaagaatgatgacgatggcattacaacgaatactggattctgggaaaaatctt
aaaggaccagcatcacaagctaggaataaaatgattgttcttctaacaacacaatttgga
ggagaactagttaatgttttgcaagattacatattgtctgaccttcgggtacatattgac
ctggcatttgcgtggttgtaccaggagtatgccaagtacagaggctatatgctgcttctc
gcggatgaaatgccctctcttgagcaatatgattcactactttgcaatatattagcgagt
ttattggtacgagatgatcaaagagatggtgtgtttgcacgactgggcttggagtcaccg
cttatcacaccaaatgccttgaagattatcaaacgattctgtgaacatgaggttcatttt
tttgttggtttgcaaacactacgtgatattatactaaagagacctgcaaacatggaacgg
tatctggacaatatgctggaactcacatggaatgaaaagattgaagttagatcccaggca
acacaatatgtcaagaggttctatgagaagcccgacatgaggcagcacattgaaaattat
gcaactaaaagcctgcgacacttgaaaagtgagaagccaccagcaagcctagtcctcacc
ttatcgtcaccagagcagcgagttgaagcaagtaaaacatggactgaagacactgccaaa
atatgtctcaatgtatatctggcccttctacctattaaccataagctaatccatgaattg
gctactgtgtatgtggcggcatcagcaacaatcaaacgtgtcgttttacgtaaccttgaa
agtcctgtacgtggcatgggcatgtcatcaccagagctcttaacactcttagaaacatca
cccaaaggtgctgagactctcatcaccagaatgctacatatactcactgataaagtgccg
ccatctcaggaccttgtcaggagagtgcgtgatttgtaccagaaacgcgtacctgatgtg
cgtttcctaatccccgtcttgattggccttgagaagagtgaagtaatggcagctcttcct
aaacttataaaactgaatccaaacgtagttaaagaagtcttccaccgattacttatgagt
caccaggaagggggccttggtcagagccccctcacacctgctgaacttcttgtagctttg
cacaacctcgacatgtcaaagtgtgacatgaagtctgttattaaagctacaagtttgtgc
ttcagtcagaagaatatctacacccaggaggtgttggcagttgtaatgcagcaactgatg
gaacagaccccgatccctaccctcttgatgcggacagtgatccagtccctgagcatgtac
ccccgtctcattggtttcgcaatgaatattttgcagcggttaatagtgaagcaagtgtgg
cggtaccctaaagtctgggaaggctttatcaagtgttgtgagcgcaccaaaccccaatca
ttccaagtgttacttcagttaccaccaagccagctgacacttatgtttgagaccagtcca
gatcttcgactgccattactagaacatgtcaaatcttttacaccacaccagcaagcacac
attccaaagaccattatgacagtgctggaaactgatgctatagaggcaaagagaaagaga
gaacaagaagaaatggacaggaagagaagagagaaagaagaggaggagaggaaaaagaaa
gcagctgaagaaaaagccaggcagcaacggctactacaggaaaaaattgagcgagagagg
aggatgaaggaggaagaagccaaggcaaaaaagaggaaagaaatggaggaaaaggcatta
aatgaaatcaaagcaaggcttcaggcagacaaagaaaagaaagaagaggaggaa
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