Anneissia japonica (feather star): 117105995
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Entry
117105995 CDS
T08613
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117105995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajc03041
]
117105995
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117105995
Spliceosome [BR:
ajc03041
]
Complex C
Other components
Step II factors
117105995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
ABC_tran
AAA_19
nSTAND3
nSTAND_NTPase5
AAA_16
AAA_30
Sigma54_activ_2
PhoH
NB-ARC
TsaE
Cas3-like_C_2
CDC45
Motif
Other DBs
NCBI-GeneID:
117105995
NCBI-ProteinID:
XP_033103189
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MDELRKLEHLSLVSKVCTEIENHLGVNDKDLAEFLIDLAEKNDTVQSFQGALEENGVEVQ
ESFVRNLLRLIQHMKPKSVPSTSSTVQVVKEKTKLDKKKEAFPGLCLPDEEKKPVIQAKD
VDVANSLMSELEALIPKGIVPNEKVSSKRDKRSRSKSKEKEKDKHKNKGKREKKSRRRSR
SSSRERRRERSRSKERRRRSRSRDRSRSRERTRDYDNSRRHKDRDSSRGGGSKKYDDRFV
SKPPPMDPEVGEVYNGKVTSVMVYGCFVQLEGLRRRCEGLVHISELRREGRVSDVSEVVA
KGQIVKVKIISISGTKISLSMKDVNQETGEDLNPRGRRNALEDTSRSEESLRNPDRPSNM
PLLHVPEIEDDGIRKRVQRMTSPEKWELQQMRSAKCILITELPNYDEETGILTKDGDESD
EDVEIELVEEEPPFLRGHGRQSMELSPVRIVKNPDGTLSKAAMMQSALSKERREVKIAQE
RAEAENLPTGMNKNWVDPMPNSERALAVNVRNMVMPAPEMPEWKKVAFGGTNASYGRKTK
MSIIEQRQSLPIYKLKDQLVHAVESNQILVVIGETGSGKTTQMTQYLAEAGYVTTGKIGC
TQPRRVAAMSIAKRVSEEFGCRLGQEVGYTIRFEDCTSPETKIKYMTEGMLLRECLIDAD
LSQYSIIMLDEAHERTIHTDVLFGLLKKAIKKRPDMKLIVTSATLDAVKFSQYFFEAPIF
TIPGRAFPVETLYTKEAETDYLDASLITVMQIHLTEPPGDILLFLTGQEEIDTACEILFE
RMKSMGSEVPELIILPVYSSLPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVV
DPGFVKQKVYNSKTGMDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTT
AVPEIQRTNLVSTLLSLKAMGINDLLSFDFMDPPPMETLITAMEQLHSLSALDDEGLLTR
LGRRMAEFPLEPMLSKVLIMSVHLGCSDEILTIVSMLSVQNVFYRPKDKQAIADQRKAKF
HQQEGDHLTLLAVYNSWKNNKFSNPWCFENFVQARTLRRSQDVRKQLLGIMDRHKLDVVS
CGKTTAKVQKALLSGFFSNAAKKDPQEGYRTLCDQQVVYIHPASALFNRQPDWVIYHELV
LTTKEYMREVTTIDPKWLVEFAPAFYKFSDPTKLSKQKKQQRLEPLYNKYEEPNSWRISR
HRIRRN
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactccgcaagcttgagcacttgtcgctggtatcaaaagtctgcactgaaata
gagaatcatcttggtgttaatgacaaagatcttgctgagttcctgattgatcttgctgaa
aagaatgacacagtgcaatcattccaaggagccctcgaggagaatggagttgaggtgcaa
gaatcctttgtcagaaaccttctccgtttgatacaacacatgaaaccaaaatctgtacca
agtacttcatctaccgttcaggtggtaaaggagaaaacaaagttagacaaaaagaaggag
gcttttcctggcctctgtcttccagacgaggagaaaaagcctgttattcaagccaaagat
gttgatgttgcaaattccttaatgagtgaacttgaggcattgattccaaaagggattgta
cctaatgaaaaagtatcaagtaaaagagataaaagaagtagaagtaagagtaaagaaaaa
gaaaaggataaacataaaaacaaggggaaacgagagaaaaaaagcaggagaaggtctcgt
tcctcaagtagggagagacgaagagagcgaagtcgcagcaaagagaggaggagaaggagt
agaagccgagataggagtagaagccgcgagaggacgagggattatgataactcacgcagg
cacaaagacagggattctagcagagggggtggtagcaaaaagtatgatgaccggtttgtg
agtaagccaccacctatggacccagaagttggagaagtgtataatggtaaagtgaccagt
gttatggtgtatggatgctttgtacaacttgaaggattaaggagaagatgcgaaggactt
gtgcatatatcagagttacgaagggagggtcgagtgtcagatgtcagtgaagttgttgcc
aaaggtcagatagtaaaggtgaagatcattagcatatcagggactaaaatcagtctttct
atgaaagatgtgaaccaggagactggtgaagatctgaaccctagagggcgccgtaatgct
ctagaagatacctccaggtcagaggagtcattaagaaatcctgatcggccatccaacatg
ccactcttgcacgtacccgagatagaagatgatggcatacggaagcgagtgcaacgtatg
acatcaccagaaaagtgggagttgcaacagatgagatcggccaagtgtattctgataacg
gagcttccaaactatgatgaggagacaggcatccttactaaagatggagatgagtccgac
gaagatgttgagatcgaattggtggaggaagaaccaccatttctacggggacatggtcgc
caaagcatggaactcagtcctgtcaggattgtgaagaatccagatggaaccctgtctaag
gctgctatgatgcagagtgcactgtcgaaagaaaggcgagaagtgaagattgcccaggaa
agggcggaggcggaaaacttaccaacaggcatgaacaagaactgggtggatcctatgcca
aatagtgaacgagcattggctgtgaacgtgaggaacatggtgatgccagcgccagagatg
ccagagtggaagaaggttgcgtttggtggcacaaacgcctcttatggaaggaagacaaag
atgtcgattattgaacagcgtcagagtctgccaatatacaagctgaaggatcagttggtc
catgctgtagaaagcaatcaaattctagtagtaattggagaaactggctcaggtaaaaca
acacagatgactcagtacctagctgaggcaggctatgtaactacagggaagattggttgt
acccagcctcgtagggtagctgctatgtctattgctaagagagtgtcagaggaatttggt
tgtcgtttgggacaagaagttggttacacgatccgttttgaagattgcacctccccagaa
accaagatcaagtacatgacagagggaatgttgctccgagaatgcctcattgatgcggat
ctctcccagtattctatcatcatgttggatgaggcccatgaacggaccattcatacggac
gttctttttggtctcttgaagaaagccattaagaaacgtcctgacatgaaactcattgta
acctctgccacattggacgctgtaaaattttcgcaatatttcttcgaagccccaattttt
acaattcctggtcgtgcattccctgttgagacactttacacaaaggaagcggagaccgat
tacctcgatgcttctcttatcactgttatgcagatccatctaacagaaccaccaggtgac
attcttctgttcttgactggtcaagaggagattgacactgcttgtgagattctatttgag
aggatgaaatcaatggggtcagaggtccctgaactgataattctgcctgtgtactcatct
cttcccagtgaaatgcaaacaaggatatttgacccagctcctcctgggagtaggaaggtt
gtcatagcaaccaacattgcagagacatcgttaacaattgatgggatctactatgtggtt
gacccagggtttgtcaaacagaaagtttacaattccaaaactggaatggaccagctcgtt
gtcacacctatttcccaggcacaagctaagcagcgtgcaggtcgtgctggccgcactggt
ccaggaaagtgctacaggttgtatacagaacgagcatatcgggatgagatgctaacgact
gccgtgcccgagatccagcgtaccaatctagtaagtacgctgctttctctcaaggccatg
ggcatcaacgatcttctgtcatttgattttatggatccaccccctatggagacactcatc
acagccatggaacagcttcactctctgagtgcccttgatgatgagggtctacttactagg
cttggaaggaggatggcagaatttccactggagccgatgttgtcaaaggttttaatcatg
tctgtacacttaggatgcagtgatgagattcttactatagtgtcaatgctctctgttcaa
aatgttttttatagaccaaaggacaagcaagccatagcagaccagcgcaaggccaagttc
caccaacaagaaggcgaccaccttacactcttagctgtttacaattcctggaaaaacaac
aagttttcaaatccatggtgctttgagaattttgtgcaagcaaggacactgagacggtct
caagatgtccgcaaacagttactgggcattatggacaggcacaagctagatgttgtttcc
tgtggaaagacaacggccaaagtccagaaagctcttctcagtgggttcttcagcaatgct
gctaaaaaggatcctcaggaaggctatcgtacgctttgtgaccagcaggtggtgtacatc
catccagcaagtgcattgttcaacaggcagccagactgggtgatataccatgagctggtg
ttgacaactaaggagtacatgagagaggtgacaaccattgaccctaagtggctagtggag
tttgcgccggcattctacaaattttcagacccaactaaacttagcaaacagaagaaacag
cagcgtcttgaaccactctacaataaatatgaagaacctaactcgtggcgaatatctaga
catagaatcagacggaattaa
DBGET
integrated database retrieval system
